Treponema denticola: TDE_1371
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Entry
TDE_1371 CDS
T00157
Name
(GenBank) RNB-like family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tde
Treponema denticola
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tde03016
]
TDE_1371
Enzymes [BR:
tde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TDE_1371
Transfer RNA biogenesis [BR:
tde03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TDE_1371
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AAS11888
UniProt:
Q73MY5
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All DBs
Position
complement(1413388..1415259)
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AA seq
623 aa
AA seq
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MNTNAIVLYKNRPALIKGQADGKFEIETETGIKKVREKDFSVLAPSNSSSLKNILTAACP
EPDFNEAADFFEEGTALFSEISELVWENLNPEQMWAAWLLVSASPLFIAESPDLPIKIRT
KEEAESIAAAALKKETEKQAEEQERKEFISSLSKFIKEKKEENFDLKKYSHFLQEIEALA
LEKTDKSKLLNEAHLKETPESAHKILISTGYWKIEKNPYPTRFKHPLNSPKLELPPIEHN
KKYEDLTHLTSYAIDNEGSTDPDDAVCFDGENLWIHIANPADIITPDSKSDMDARKRGAT
LYIPEGVSRMLGESAVDAFALGLHDDSYALSFKLKLNDSAEILDVDILRTKIKVSCISFE
KADEEKMNTNLKHLFEIAEKNRKKREAAGAVSIDMPEVQIKVETENENQKVFISPYNFTE
SFLMIKEMMLLAGEAAARFAFKNNIPFQYVSQEAPELPKKLPEGLAGEYRKRKAMRPRNV
GTIPAMHSALGIAMYSQITSPLRRYGDLVAHQQLLKFIDGKEVMKTDDLLMRIAAGDIAG
KNCSYAERASRQHWTLIYLLQNPDWQGEAVILETIKNTARISIPSIGYETEMRLKKELSI
NERINVKAEDIDIPNLTVRFVQV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaatgcaatcgtcttatataaaaaccgtccggctcttataaaaggacaggct
gacggaaaatttgaaatagaaacggaaacgggcatcaaaaaggtgcgcgaaaaagatttt
tccgttttggctccaagtaactcctcatcgctaaaaaacattttgaccgctgcttgtccc
gaacctgactttaatgaagccgccgacttttttgaagaaggaacagccctcttctctgaa
ataagcgaattggtttgggaaaatttaaatcccgaacaaatgtgggcagcttggctttta
gtttcggcatctcctctttttattgcagaaagccctgaccttccgattaagataagaaca
aaagaagaagctgagtccatagccgctgcagcactaaaaaaagaaaccgaaaaacaagcg
gaagagcaagagcggaaagaatttataagcagcttatcaaaatttataaaagaaaaaaag
gaagaaaatttcgacttaaaaaaatattctcactttttgcaggaaatagaagctcttgcc
ttggaaaaaaccgacaagtcaaaacttttaaatgaagctcacttaaaagaaactcctgaa
tctgctcataagattttaattagtacaggttattggaaaatagaaaaaaacccctacccc
acccgctttaagcatcctttaaattcgccgaagctggaattgcctcctatcgagcataac
aaaaaatacgaagacctgactcatcttacctcctatgcaatcgacaacgagggcagcacc
gatcccgacgatgccgtatgctttgacggagaaaacttatggattcacattgcaaaccct
gccgacataattacccccgattccaaaagcgatatggacgcaaggaaacggggtgcgacc
ctttacattcctgaaggcgtatcccgaatgttgggagaatcggcagtcgatgcctttgcc
ctcggcctgcatgatgactcttatgccctgtcgtttaaacttaagctaaatgactcggct
gaaattctcgatgtagatattttgcgtaccaaaataaaagtaagctgtataagttttgaa
aaggccgatgaagaaaagatgaatacaaacctaaaacatctttttgaaatagcagaaaaa
aacagaaaaaaacgggaagcggcaggagctgtttcgatagatatgcccgaagttcaaatc
aaggtagaaaccgaaaatgagaaccaaaaagtttttataagcccgtataattttacggaa
tcttttttgatgataaaggaaatgatgctccttgcaggagaggccgctgcccgctttgct
tttaaaaacaatattccctttcagtatgtaagtcaggaagcacccgaattaccgaaaaaa
cttcccgaaggtcttgcgggcgaataccgaaaaagaaaagctatgaggccgagaaatgtg
ggtacaattcctgcaatgcattcagccctcggaattgcaatgtacagtcaaattacaagc
cccctccgccgctatggagacttggttgcccatcaacagcttttaaaatttatcgacgga
aaagaggtgatgaaaaccgatgaccttcttatgagaatagcggcgggagacattgcaggc
aaaaattgttcctatgctgaaagagcctcgcgtcaacactggactctgatctatctatta
caaaaccctgactggcaaggagaagcagtaatcttagaaacaataaaaaatactgctcgc
atttccattccgtctatcggctatgaaaccgaaatgagattaaaaaaagaattatcgatt
aacgaacgcataaatgtaaaagccgaggatatagatattccgaatctgactgtaagattt
gtgcaggtgtaa
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