Treponema denticola: TDE_2309
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Entry
TDE_2309 CDS
T00157
Name
(GenBank) sigma-54 dependent transcriptional regulator, putative
KO
K12146
hydrogenase-4 transcriptional activator
Organism
tde
Treponema denticola
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tde03000
]
TDE_2309
Transcription factors [BR:
tde03000
]
Prokaryotic type
Helix-turn-helix
Other families
TDE_2309
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
GAF_3
AAA_2
Mg_chelatase
HTH_8
AAA
AAA_7
AAA_16
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AAS12828
UniProt:
Q73KB0
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Position
complement(2346648..2348189)
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AA seq
513 aa
AA seq
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MNKAISVLNKTNPISAEQALELILEALRELVDYELAVVMGFEDKNVLKVRKAIGPLSSKL
LDDFTINLNKRKDIARILDERKAFLFDENIPHVDTYDEIMKLPENHSCLVAPLYIGDKAI
GMMTLDHSMCSRFTPEIVRFISTISKLISVALVQTDASQSLIQKTESLLLERNVLLTAST
NVFKDMVGSSRAWTTVLDSIKLVAASDVPVLISGETGTGKEQAARTIHRLSNRAEKPFVP
VNCSALVQSLAESEIFGHEKGAFSGAAALRKGRFELADGGTLFLDEVGDLPFDLQPKLLR
VLQDGKFERVGGEKPVSVDVRIIAATNVDLAEAVSMGRFREDLLYRLDVFPLRLPPLRER
DDDTALLAEHFISDIRKRKGFENTSLSMAAIEKLMSMPWHGNVRELKNVVERAAILSQGG
EIPAEHLVPGTREFYISNAAKKKPLKPAVNKETEKDKVLPEDIKPFDEAQTEIIQKALLA
SNGKIYGKDGAAALLNLKPGTLQSKMKKLGIKY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctatatccgttttaaataaaacaaatcccatctcggccgagcaggcattg
gagcttattcttgaggctttaagagaactggtcgattacgagcttgccgttgtgatgggc
tttgaagataaaaatgttctaaaggtaagaaaggccataggcccgctttcttcaaaatta
ttggacgattttacgattaacttaaacaaacggaaagacattgcccgaattttagatgaa
agaaaggcttttttgtttgatgaaaatattccccacgtcgatacctatgacgaaataatg
aagctgcccgaaaatcattcttgtttggtggctcccctttacataggagacaaggctatc
ggaatgatgaccttggatcacagtatgtgttcccgctttacgcctgaaatcgtccgtttt
atatctacaatttcaaaacttatttcggttgccttggtccaaacggatgcatcccaatcc
ctcattcaaaaaaccgaaagcctccttctcgaaagaaatgttttgctcaccgcttcgaca
aatgtttttaaggatatggtcggttcttcccgggcttggactacggttttagattcgata
aagctggttgcggcctctgatgtgccggttttaatttcgggagaaacgggaacgggaaaa
gaacaggcagcccgcaccattcacaggctttccaacagggccgaaaaaccctttgtgccc
gtaaactgttctgcccttgtgcagagccttgccgaaagtgaaatcttcgggcatgagaaa
ggcgccttttcgggggctgcggccttgcggaagggacggtttgaacttgccgatggcggc
accctctttttggacgaagtgggggacttgccctttgatttacagcccaaacttttgcgt
gttcttcaagacggaaaattcgagcgtgtcggcggggaaaaacccgtttctgtggatgtg
cgcataatagccgcaaccaatgtcgatttggccgaggccgtttcgatgggacgcttccgt
gaagacctgctttacaggctggatgttttcccgctaaggcttccgcctttgagggaacgc
gatgacgatacggctcttttagccgaacattttatttcggatatacgcaaacggaagggc
tttgaaaacacgagcctttcgatggctgcaatcgaaaaacttatgtctatgccttggcat
ggaaatgtccgcgagcttaaaaacgttgtagagcgggctgcaattctttcgcaaggcgga
gaaatccctgccgagcacttggtgccgggaacaagagaattctatatttcaaacgctgct
aaaaaaaagcccctaaagcctgccgtaaataaggagactgaaaaagataaggttttgcct
gaagatattaaaccctttgatgaggctcaaaccgagattattcaaaaagctcttttagcc
tcaaacggaaaaatttacggcaaagacggagctgccgctcttttaaacttaaaaccggga
acccttcaaagtaagatgaaaaaactgggcattaagtactaa
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