Treponema denticola: TDE_2786
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Entry
TDE_2786 CDS
T00157
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tde
Treponema denticola
Pathway
tde03030
DNA replication
tde03430
Mismatch repair
tde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TDE_2786 (dnaE)
03430 Mismatch repair
TDE_2786 (dnaE)
03440 Homologous recombination
TDE_2786 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tde03032
]
TDE_2786 (dnaE)
03400 DNA repair and recombination proteins [BR:
tde03400
]
TDE_2786 (dnaE)
Enzymes [BR:
tde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TDE_2786 (dnaE)
DNA replication proteins [BR:
tde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TDE_2786 (dnaE)
DNA repair and recombination proteins [BR:
tde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TDE_2786 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
EMG1
Motif
Other DBs
NCBI-ProteinID:
AAS13303
UniProt:
Q73IZ1
LinkDB
All DBs
Position
complement(2839313..2842762)
Genome browser
AA seq
1149 aa
AA seq
DB search
MAVDFVHLHVHSDFSLLDGAASVKALAAKAEKLGQTALALTDHGNMFGAINFYNACKEKN
IKPIIGCEFYVAPESRFEKKETPGGKKYYHLILLAKNETGYRNLMVLCSKGYTEGMYYKP
RIDDELLAQYAEGLICLSACLAGELPVLLLNGEKEKAEAHVRKYREIFGAENYFIELQDH
GLKEEKKASKLLIEMARKVGVPLVLTNDIHYVEQKDYVAQDILMCIGMKKLRTDTNRMQF
EGSEFYFKSGEEMAQLFPEYPEAILNTVRIAEMCNLEIPQPGPILPIYKIPEDFSSKEDY
IRHLAEEGLKKRYPVITDEIKNRLNYELDIVIKMDFVGYFLIVWDFINWAKNNGVPVGPG
RGSGAGSILAYSLRITDIDPLKYNLLFERFLNPERVSMPDFDVDFCFERRQEVIEYVRQK
YGDENVGQIITFGTLKPKAVVKDVGRVLNIPLADVNAITKLIPPKPLTDGIKEVTLKYAV
DVVPELKEMAEDSQYKELFEISIALEGRNRNSSLHAAGIVIGKTALTDYVPLYKDSKTGK
VATQFTMDLIENCGLVKMDFLGLKTLTLIKHTEDLIHKRGGEWRKFSIGDIDYSDAETFK
MLSEGKAAAVFQFESQGMQNILKRAKPSKMEDLIALNALYRPGPMDYINQFIESKFDNSK
IKYPDPCLEDILSETYGVIVYQEQVMQVAQRIAGYSLGQADILRRAMGKKKIEVMKTEKE
KFIKGAQEKGFSREDADRIFEILIPFAGYGFNKSHAAAYSVLAFQTAYLKAHFPAEFMAA
NLTNEITSTDKLPEYIAEAEKMGLKILPPHVNLSDPYFSVSSDGNIIFGLLGIKGVGMQA
AHELVEEREKNGRYKSFIDFLERNDLHTQNKRNLEVMIKTGCFDGLGQERSTLMVNMDGA
VAYASQKKENESTGQGSLFEGSGIKEFSDFVFEKIEEFPKKEKLRLEKELMGFYISGHPL
DEYRKVIDNSATLDISHLARATSKKRYVLVGMLTGVRQHQTKKGAMMGFGTFEDLNGTLD
LVFFPKTWEKHRAVLLPETVCGFAGSIDNSDGESHSFLVDEVLEIDKLQQKALSEVHIEL
DENITSAKELTGLKDFLYERSGNCEVYIHVKDEDKAYIIKASPQIRIPSTPEFIEELNMQ
FGVEQIWLE
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgattttgttcatcttcatgttcattccgatttttctcttttagacggagct
gcttcggtcaaagctcttgcggcaaaggccgaaaagctggggcagacagcccttgcattg
accgatcacggcaatatgttcggggctataaatttttataatgcctgtaaagaaaaaaat
ataaaacccataatcggctgcgaattctatgttgctcccgaaagccggtttgaaaaaaaa
gaaactccgggcgggaaaaaatactaccaccttatcctcttggcaaagaatgaaacagga
taccgcaatttaatggtgctttgctctaagggatatactgagggcatgtattataagccg
cgtatagatgatgagcttttggcacagtatgcggaagggcttatatgcttgtcggcctgt
cttgcaggagagcttcctgttcttttattaaacggcgaaaaagaaaaggccgaagcccat
gtccgaaaataccgtgagattttcggtgccgaaaattattttatcgagcttcaagaccac
ggactaaaagaagaaaaaaaggcttccaaacttttaatcgagatggcccgcaaggtcggc
gttcctttggttttgaccaacgatattcattatgtagaacaaaaagattatgtagctcaa
gatattttaatgtgtatcggaatgaaaaaacttagaaccgataccaaccgcatgcagttt
gagggaagcgaattttattttaagtcgggagaagaaatggctcaactcttccccgaatat
cctgaagcaattttaaacaccgtccgtattgcagaaatgtgcaatttggaaattcctcaa
cccggccccattcttccgatatacaaaatccctgaagattttagctcaaaggaagactat
atcaggcatcttgctgaggaaggcttaaaaaagcgttatcccgtcattaccgatgaaata
aagaataggcttaactatgagctcgatatagttataaaaatggactttgtcggctatttt
ttaattgtgtgggattttataaactgggcaaaaaataacggagttcccgtaggccctggg
cgcggttccggagcaggctcaatccttgcatactctttgaggattaccgacatagacccc
ctaaagtacaacctcctttttgagcgctttttaaatcccgaaagggtttcgatgcccgac
ttcgacgtagacttttgcttcgaaaggcggcaggaggtaatagagtatgtgcgtcaaaaa
tatggggacgaaaatgtcggtcaaatcatcaccttcggaaccttaaagcccaaggctgtc
gtaaaagatgtgggccgggttttaaatattccgcttgccgatgtaaacgccattacaaaa
ctcatacctcccaaacctttaacggacggtataaaagaggttacattaaaatacgctgtt
gatgtagttccagaattaaaagaaatggccgaagactcccaatacaaagagctttttgaa
ataagcatagctcttgagggccgaaaccgtaattccagtcttcatgctgcgggcatcgtt
ataggtaagacagccttaaccgactatgttccgctttacaaggattcaaaaaccggaaag
gtcgcaactcaatttacaatggacttaatcgaaaactgcggccttgtaaagatggacttt
ttaggcctaaaaaccttaacccttataaaacataccgaagacctaatccataagagggga
ggggaatggagaaaattttctataggcgatattgattattcggatgctgaaacgtttaaa
atgcttagtgaaggtaaagctgctgcagtcttccagtttgaaagtcagggaatgcaaaat
attttaaagcgtgcaaagccctccaaaatggaagatctgattgctttaaatgccttgtac
cgtccggggcctatggattatatcaaccagtttatcgagtcaaaattcgataattccaaa
atcaaatatcccgacccctgccttgaagatatactttccgaaacctatggagttatcgtt
tatcaggaacaggttatgcaggttgcccaaagaatagcgggctactctttaggtcaggcc
gatatactccgccgtgctatgggaaagaaaaaaatcgaggttatgaaaaccgaaaaagaa
aagtttattaagggtgcacaagaaaagggattcagcagggaagacgccgatagaatcttt
gagattcttatcccctttgcaggctacggttttaacaagagtcacgcagcagcctattcg
gttttagcctttcagaccgcctacctgaaagctcattttccggcagaatttatggcggct
aaccttaccaacgaaattacctctaccgacaaacttccagaatatattgcagaagccgaa
aagatgggtcttaaaattctaccgccccatgtaaatttatccgatccgtattttagcgtt
tcctccgatggaaatattattttcggccttttgggaattaagggggtcggaatgcaggcg
gctcacgaacttgtagaagaacgcgaaaagaacggcaggtacaagtcctttatcgacttt
ttggaaaggaatgatttgcatactcaaaacaagcggaaccttgaggttatgattaaaaca
ggctgttttgacggcttagggcaggagcgttctaccttgatggtaaacatggacggggcg
gttgcttacgcttcccaaaaaaaagaaaacgaaagcacggggcagggaagtctttttgaa
ggctccggtataaaagagttttcggactttgtctttgaaaaaatcgaagagttccccaaa
aaagaaaaactgcggctcgaaaaagagctgatgggcttttatatttcgggacaccctttg
gatgagtaccgaaaggttatagataattccgctaccttggatatttcacatcttgcacgc
gcgacctcaaagaagagatatgttcttgtcggtatgcttacaggagtaaggcagcatcaa
acaaaaaaaggtgcgatgatgggcttcggaacctttgaagacttaaacggaacattggat
ttggttttttttccaaagacttgggaaaaacatagagctgttcttttacctgaaaccgtc
tgcggctttgccggttctatcgataacagtgacggggagtctcattcctttttggtagat
gaagttttggaaatcgataaattacagcaaaaagctttaagcgaagttcatattgaactt
gatgaaaatataacgtcggcaaaagagttgaccggcttaaaagactttttatatgaaagg
tcagggaactgcgaggtttatattcatgtaaaagatgaggataaggcttatataattaag
gcttctcctcaaattcgaattccttcaactccggaatttattgaagaattaaatatgcag
ttcggggttgaacaaatttggcttgaatag
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