Tessaracoccus defluvii: H9L22_01630
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Entry
H9L22_01630 CDS
T06774
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tdf
Tessaracoccus defluvii
Pathway
tdf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tdf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H9L22_01630 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdf03021
]
H9L22_01630 (rpoC)
03400 DNA repair and recombination proteins [BR:
tdf03400
]
H9L22_01630 (rpoC)
Enzymes [BR:
tdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H9L22_01630 (rpoC)
Transcription machinery [BR:
tdf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H9L22_01630 (rpoC)
DNA repair and recombination proteins [BR:
tdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H9L22_01630 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QNP56223
UniProt:
A0A7H0H6Q7
LinkDB
All DBs
Position
361291..365232
Genome browser
AA seq
1313 aa
AA seq
DB search
MLDVNFYDELRIGLASAEQIREWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAHMITAVDEEARHRDLASLQAKVEVEAKQVASRRDADIEARMRKLEED
MAQLEEEGAKADVKRKVREAAEKEAGLIRTRTQRQLDRIDEVWNRFKTLKVQDLEGDEML
YREMTKRFGRYFEGSMGAEAIQKRLQSFDLQAESVQLREIIATGKGQRKTRALKRLRVVS
AFLSGTSSPAAMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLDDLNHAQNIKAAKRMVERQR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGRPVTMPTQDMIIGHYFLTLERHGRGEGRA
FSSLAEAVMAYDRGELEVTSPIKLRLSGVVVDGVTPRADGTVLLDTTLGRALFNEALPDG
FGYVNTVVGKKVLGQIINELAERYAKVTVATALDNLKAMGFRWASRSGVTVSISDVQTPP
QKAQILDGYEKRASKIDKLYERGSVTEDERRQELISIWTDATAELTEAMKDNFTEDNPIF
MMVDSGARGNMTQMRQIAAMRGLVANPKGDIIARPIKSNFREGLSVLEYFISTHGGRKGQ
ADTALRTAESGYLTRRLVDVSQDVIIREEDCGTERGLMKVIAKWSTPGVDADTGRPVQIP
AEPFAKDATVETMGDVETAVYARTLAVDTADAKGNVLVTAGTDLGDAEIRTLVAAGVTSV
KVRSVLTCESAVGTCAMCYGRSLASGKTVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGV
AGDDITQGLPRVTSLFEARQPKAKAPIAEADGVVRIEDGDRSRKIIIVRDDGGEDLEYPV
GRRTRLEFEDHDGVRMHIRDGARVSIGQQLTAGQVDPQEVLRVRGLRKVQEHLVEEVQKV
YATQGAPIHDKHIEIIIRQMLRRVTVIDSGDTQMMPGELVDRAMYEAANRQAISEGGKPA
EGRPVLMGITKASLATESWLSAASFQETTKVLTDAAIQGKSDSLVGLKENVILGKLIPAG
TGLDRYRNIRVEPTDEARATAYTMSYDPYDYSFGSDVVGPAVPLDEMDFGELR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtgaacttctacgacgaactgcgaatcggcctcgcgagcgcggagcagatt
cgcgagtggtcccatggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
ccggagcgcgacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgacccggagcaacgtgcgccgcgagcgcatgggccacatcgagctcgccgcccct
gtcacccacatctggtacttcaagggcgtcccgagccgtctcggctacctcctggacatc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgcacatgatcaccgccgtcgac
gaggaggcccgccaccgcgacctcgcgtcgctgcaggccaaggtcgaggtggaggccaag
caggtcgcctcccgtcgtgacgccgacatcgaagcgcggatgcgcaagctcgaagaagac
atggcgcagctggaggaagagggcgccaaggccgacgtcaagcgcaaggtccgcgaggcc
gccgagaaggaggcgggtctcatccgcacccgcactcagcgccagctcgaccgcatcgac
gaggtgtggaaccgcttcaagacgctcaaggtccaggaccttgagggcgacgagatgctc
taccgcgagatgaccaagcggttcgggcggtacttcgagggctcgatgggcgccgaggcg
atccagaagcgcctccagtccttcgacctgcaggcggagtccgtgcaactgcgcgagatc
atcgccaccggcaaggggcagcgcaagaccagggcgctcaagcgcctccgcgtcgtcagc
gccttcctctccggcaccagctcgccagcggcgatggtgctggatgccgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctcgacggtggccgtttcgccacgtcggacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccgactgaagcggctgctggatctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgactcg
ctgttcgacaacggccgtcgtggccgcccggtgaccggacccggcaaccgtcccctgaag
tcgatctccgacatgctcaagggcaagcagggtcgcttccgtcagaacctcctcggcaag
cgtgtcgactactcgggccgttcggtcatcgtggtgggcccgcagctcaagctgcaccag
tgcggcctgccgaaggccatggcgctcgagctcttcaagccgttcgtcatgaagcgcctc
gacgacctcaaccacgctcagaacatcaaggccgccaagcggatggtcgagcgtcagcgt
ccggtcgtgtgggacgttctcgaagaggtcattgccgagcaccccgtgctgctgaaccgt
gcaccaacgctgcaccgtctcggcatccaggccttcgagccgcagctggtcgagggtaag
gccatccagatccacccgctggtctgtaccgccttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgtcggcggaggcgcaggccgaggcacgcatcctgatgctg
tcgacgaacaacatcctgaagcccgccgacggtcgccccgtgaccatgccgacgcaggac
atgatcatcggccactacttcctgacgctcgagcgtcacggtaggggcgaaggccgcgcg
ttctcgtcgctggcggaggccgtcatggcctacgaccgcggcgagctggaggtcacctcc
ccgatcaagctgcgcctcagcggcgtcgtcgtcgacggggtcaccccgcgcgccgacggc
accgtcctcctggacaccacgctggggcgggccctgttcaacgaggcgctgccggatggt
ttcggctacgtgaacactgtcgtcggtaagaaggtcctcggccagatcattaatgagctg
gctgagcgctacgccaaggtgaccgtcgccaccgcgctggacaacctgaaggccatgggc
ttccgctgggcttcccgctccggtgtcaccgtgtcgatctccgacgtgcagacgccgccg
cagaaggcgcagatcctcgacggctacgaaaagcgggccagcaagatcgacaagctctac
gagcgcggatcggtgaccgaggacgagcgccgtcaggagctcatctcgatctggaccgac
gcgacggccgagctgaccgaggcgatgaaggataacttcaccgaggacaacccgatcttc
atgatggtcgactcgggtgcacgaggaaacatgacgcagatgcgtcagatcgccgccatg
cgtggcctcgtggccaacccgaagggcgacatcatcgcccgcccgatcaagtccaacttc
cgtgagggcctgtccgttctcgagtacttcatctcgacgcacggtggtcgtaagggccag
gccgataccgctctgcggacggccgagtccggctacctgacccgtcgtctcgtcgacgtg
tcgcaggacgtcatcatccgtgaagaggactgtggcaccgagcgtggcctgatgaaggtc
atcgcgaagtggtcgacgcctggcgtcgacgccgacacgggtcgtccggtccagattccg
gctgagccgttcgccaaggacgccacggtcgagaccatgggcgacgtcgagaccgcggtc
tacgcacgcaccctggctgtcgacaccgccgacgcgaagggcaacgtgctggtcacggcc
ggcaccgacctcggcgatgccgagatccgtaccctggtcgcggccggcgtcacgtcggtc
aaggtccgctccgtcctcacctgtgagtcggcggtcggcacctgcgccatgtgctacggc
cgttcgcttgcctccggcaagacggtggacgtcggcgaggccgtcggcatcgtcgcggcc
cagtcgatcggtgagccgggaacccagctgacgatgcgtaccttccacaccggcggtgtg
gcgggcgacgacatcacgcagggtctgccgcgtgtcacgagcctcttcgaggcccgccag
cccaaggccaaggctccgatcgcggaggctgacggtgtggtgcgcatcgaggacggcgac
cgttcgcgcaagatcatcatcgtgcgcgacgacggtggcgaggacctggagtacccggtc
ggacgtcgtacccgtctcgagttcgaggaccacgacggcgtccggatgcacatccgcgac
ggtgcccgggtcagcatcggtcagcagctgaccgccggccaggtcgatccgcaggaggtt
ctgcgggtgcgtggtctgcgcaaggtgcaggagcacctggtggaggaggtccagaaggtc
tacgcgacccagggcgctcccatccacgacaagcacatcgagatcatcatccggcagatg
ctgcgccgcgtgacggtcatcgactccggcgacacgcagatgatgccgggcgagctcgtg
gaccgcgcgatgtacgaggcggcgaaccggcaggcgatctccgagggcggcaagcctgcg
gagggacgtccggtgctcatgggcatcacgaaggcctcgctcgcgaccgagtcgtggctg
tcggcggcctccttccaggagaccaccaaggtcctcacggatgccgcgatccagggcaag
agcgactcgctcgtcggcctgaaggagaacgtcatcctcggcaagctcatcccggcgggt
accggtctcgaccgctaccgcaacatccgggtggagccgaccgacgaggcgcgcgccacg
gcctacaccatgagctacgacccgtacgactactcgttcggttccgacgtggtcggcccg
gccgtcccgctcgacgagatggacttcggcgagcttcgctga
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integrated database retrieval system
