Tessaracoccus defluvii: H9L22_06020
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Entry
H9L22_06020 CDS
T06774
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
tdf
Tessaracoccus defluvii
Pathway
tdf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H9L22_06020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdf03400
]
H9L22_06020
DNA repair and recombination proteins [BR:
tdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H9L22_06020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QNP56896
UniProt:
A0A7H0H8N0
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All DBs
Position
complement(1251165..1251974)
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AA seq
269 aa
AA seq
DB search
MPRSIWKGAVSFGLVSIPVKVYGATEDKDVSFRQIHSSDGGRIRYQRVCEKCGEVVTFAD
IAKGFESSDGRMAILTDDDFANLPLSTLRAVDVVQFVDEAEVDPTFFQRTYFLEAEAAGQ
KPYVLLREALAKEGKVAVVKVALRSRESLALIRPKDDLLLLHTMYWPDELRDGAFAEPSA
EVTVSDAEMEMAKLLIGQLEGTFDPAAYTDSYREALLEVVTAKLAGTAMPEAPDTSAPAG
DVVDLMAALKASVEAARKRREEAAAPKAG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccccgatccatctggaagggagccgtgtccttcggcctggtctccatccccgtcaag
gtctacggagccaccgaggacaaggacgtcagcttccggcagatccactcgagcgacggc
ggacgcatccgctatcagcgggtgtgcgagaaatgcggagaggtcgtcacgttcgccgac
atcgccaagggattcgagtcctccgacggcagaatggcgatcctcacggacgacgacttc
gccaacctgcccctgagcacgctgcgggccgtcgacgtcgtgcagttcgtcgacgaggcg
gaggtcgatccgacgttcttccagcgcacctatttcctggaggcggaggcagccggtcag
aagccgtacgtcctgctgcgggaggcgctggcgaaggagggcaaggtggccgtcgtcaag
gtcgcgttgcggtcccgcgaatcgctcgcgctgatccgtcccaaggacgacctgctcctg
ctgcacaccatgtactggccggacgaactgcgcgacggcgcgttcgcggaaccgtccgcc
gaggtcaccgtcagcgatgccgagatggagatggccaagctcctgatcgggcagctcgaa
ggcaccttcgatccggcggcctacaccgactcctacagggaggcgctgttggaggtcgtc
acggccaagctcgcgggtaccgcgatgccggaggcgccggacacctcggccccggcaggc
gacgtcgtcgacctgatggctgcgctcaaggcgtccgtcgaggccgcgcggaagcgccgc
gaggaagccgccgccccgaaggcgggctga
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