Tessaracoccus defluvii: H9L22_07670
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Entry
H9L22_07670 CDS
T06774
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tdf
Tessaracoccus defluvii
Pathway
tdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L22_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdf03019
]
H9L22_07670
03009 Ribosome biogenesis [BR:
tdf03009
]
H9L22_07670
Enzymes [BR:
tdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
H9L22_07670
Messenger RNA biogenesis [BR:
tdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9L22_07670
Ribosome biogenesis [BR:
tdf03009
]
Prokaryotic type
rRNA processing factors
H9L22_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF5351
Motif
Other DBs
NCBI-ProteinID:
QNP57526
UniProt:
A0A7H0HAG0
LinkDB
All DBs
Position
complement(1584440..1586392)
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AA seq
650 aa
AA seq
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MTAEARDAQLAALAGAIAGDTAADDEDDEDEDETAEADSDESTGDEADENGDTDDSDSDD
DSDDESTDDEDSDEDRPVRRRRRRGGRRRRRSGRDDDSSDSGDGDSDDDSDNGDNGDEHA
SDDESADDNGDSHGTDDSSSDGDGVNRRRRRRRRRSEGGTGDSSSDDEVTGIEGSTRMEA
KRQRRKESRAAGRRRAPILSEAEFLARREAVDRKLIIRQSEDYTQLAVIEDDILVEHYVD
KASATSLIGNIYVGKVQNVLPSMEAAFIDIGRGRNAVLYAGEVDWAAFGVTGEHRKVENV
LKSGQSVLVQVTKDPVGAKGARLTSHISLPGRYVVYSPGGHLSGISRKLPDVERNRLRNV
LGHLISEDESVIVRTAAEGASEDELVRDVNRLKAQWEVIEKKSKTGGAPQALYAEPDLTL
RIVRDLFTEDFGALVIQGNREQDDAFDAISAYVGHVAPQLADRLQRYEVAEDGKDVFARY
RIDEQIAKALDRKVYLPSGGSLVIDRTEAMTVIDVNTGRFTGSGGNLEATVTSNNLEAAE
EIVRQLRLRDIGGIIVIDFIDMVLPSNRELLLRRLVECLGRDRTRHQVAEVTSLGLVQLT
RKRIGTGLAEAFTETCDHCHGAGYLRFDEPVDSQAPADGGERRGARRRRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgaagcccgcgacgcgcagctcgcggccctcgcgggagccatcgccggcgac
acggctgctgacgacgaagacgacgaggacgaggacgagacggccgaggccgactccgac
gagtccaccggtgacgaggccgacgagaacggcgacaccgacgactccgattccgacgac
gactccgatgacgagtccaccgacgacgaggactccgacgaggaccgccccgtccgccgc
cgccgccgtcgcggtggccgccgtcgtcgccgcagtggccgcgacgacgactcgtccgac
tccggtgacggcgattccgacgacgacagcgacaacggtgacaacggcgacgagcacgcc
tccgatgacgagtcggccgacgacaacggtgactcccacggcaccgacgactcctcctcc
gatggcgacggtgtcaaccgccgtcgtcgccgtcgccgtcgtcgctccgaaggcggcacc
ggggacagcagcagcgacgacgaggtcaccggcatcgagggctcgacccgcatggaggcc
aagcggcagcgccgcaaggagtcccgcgcggccggtcgccgtcgcgccccgatcctcagc
gaggcggagttcctcgcccgccgcgaggccgtcgaccgcaagctgatcatccgccagtcg
gaggactacacccagctcgccgtcatcgaggacgacattctcgtcgagcactacgtcgac
aaggcgtcggccacgtcgctcatcggcaacatctacgtcggcaaggtgcagaacgtcctc
ccgagcatggaggccgccttcatcgacatcggccgcggccgcaacgccgtgctgtacgcc
ggtgaggtcgactgggccgcgttcggcgtgaccggcgagcaccgcaaggtcgagaacgtg
ctgaagtccggccagagcgtgctggtgcaggtcaccaaggacccggtcggcgcgaagggt
gcgcgtctcacgtcgcacatctcccttcccggccgctacgtcgtgtactcgcccggcggc
cacctctccgggatctcccgcaagctgcccgacgtcgaacggaaccgcctgcggaacgtg
ctcgggcacctcatctcggaggacgagtccgtcatcgtgcggacggccgccgagggggcc
agcgaggacgagctggtgcgtgacgtcaaccggctcaaggcgcagtgggaggtcattgag
aagaagtcgaagaccggcggcgccccgcaggcgctgtacgccgagcccgacctgacgctg
cgcatcgtccgcgacctcttcacggaggacttcggcgcgctggtcatccagggcaacagg
gagcaggacgacgccttcgacgccatctccgcctatgtcggacacgtcgcaccgcagctc
gccgaccggctgcagcggtacgaggtggccgaggacggcaaggacgtcttcgcccgctac
cgcatcgacgagcagatcgccaaggcgctcgaccgcaaggtctacctgccgtcgggcggc
tcgctggtcatcgaccgcaccgaggcgatgacggtcatcgacgtcaacacgggtcggttc
accggctcgggcggcaacctcgaggccaccgtcaccagtaacaacctggaggcggccgag
gagatcgtccggcagctgcggctgcgcgacatcggcggcatcatcgtcatcgacttcatc
gacatggtgcttccgagtaaccgtgagctgctgctgcgtcgactggtcgagtgcctgggg
cgcgacaggacccgtcaccaggtggcggaggtcaccagcctcggcctggtgcagctgacg
cgcaagcggatcggcacgggcctcgcggaggccttcaccgagacgtgcgaccactgccac
ggtgccggttacctgcgcttcgacgagcccgtcgactcgcaggctccggccgacggaggc
gagcggcggggggcccgtcgccgccgcaagtag
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