Tessaracoccus defluvii: H9L22_12940
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Entry
H9L22_12940 CDS
T06774
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tdf
Tessaracoccus defluvii
Pathway
tdf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L22_12940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdf03400
]
H9L22_12940
Enzymes [BR:
tdf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H9L22_12940
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H9L22_12940
DNA repair and recombination proteins [BR:
tdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L22_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_8
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QNP55151
UniProt:
A0A7H0H3N5
LinkDB
All DBs
Position
complement(2726746..2727609)
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AA seq
287 aa
AA seq
DB search
MPELPEVAALAAGLDTKLRGQAIAAGHLTSFAALKTYAPPLDALAGLEVDGVTRHGKFID
VAAQGLHLIFHLARAGWVTWHDVAPKVPARTGRSGLALRIVLDDGSGFSLTEAGTQKHLA
VYLVEDPAAVPGVAALGPDPLADDFTVDDFRAILRRAGRAQLKGVLRDQRVLAGIGNAYS
DEILHAARLSPFKPADGLDDDATADLYGHVRGVLGDAVATAREVPFDQLKDAKRSGMRVH
GRTGQPCPVCGTTVAEVSFADSSLQYCPTCQTGGKPLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgccggaggtcgcggccctcgccgcgggcctggacacgaagctgcgcggg
caggccatcgccgcgggccacctcacctcgttcgccgccctcaagacgtatgcgccgccc
ctggatgccctcgccgggctggaggtcgacggggtcacacgccacggcaagttcatcgac
gtcgcggcccagggcctccacctgatcttccacctggcccgcgcgggctgggtgacgtgg
cacgacgtcgcgccgaaggtgccggcccgcaccggccggtcgggcctcgccctgcggatc
gtgctcgacgacgggtccggcttctcgctgaccgaggcggggacgcagaagcacctggcc
gtctacctggtcgaggaccccgccgcggtgccgggcgtggcggcgctggggcccgatccg
ctcgccgacgacttcaccgtcgacgacttccgcgccatcctgcgccgggccgggcgcgcc
cagctgaagggcgtgctgcgggaccagcgggtgctggccggcatcggcaacgcctactcg
gacgagatcctgcacgcggcgcggctcagcccgttcaagcccgccgacgggctggatgac
gacgccaccgccgacctgtacgggcacgtccgcggggtgctgggcgacgcggtggccacc
gcccgggaggtccccttcgaccaactgaaggacgcgaaacgctccggcatgcgggtccat
ggacgcaccggtcagccgtgcccggtatgcggcacgacggtggcggaggtctcgttcgcg
gactcgtcgctccagtactgcccgacgtgtcagacgggcggcaaaccgctggccgaccgc
cgcatgtcgaagctgctcaagtag
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