Tenacibaculum dicentrarchi: AUW17_00580
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Entry
AUW17_00580 CDS
T04208
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tdi
Tenacibaculum dicentrarchi
Pathway
tdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AUW17_00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdi03400
]
AUW17_00580
DNA repair and recombination proteins [BR:
tdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AUW17_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
ATPase_2
AAA_14
AAA_29
GARS_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALU73883
LinkDB
All DBs
Position
complement(132762..135380)
Genome browser
AA seq
872 aa
AA seq
DB search
MAKKTAKKVTPLMQQYNGIKKKYPDAMLLFRVGDFYETFGDDAVKASSILGIVLTKRSAG
SASEIALAGFPHHSLNTYLPKLVKSGLRVAICDQLEDPKMTKSIVKRGVTELVTPGVALN
DEVLQAKSNNFLAAVHFGKKLIGISFLDVSTGEFLIAQGNQEYIDKLLQNFSPSEVLVEK
KYKQQFSELFTNRFHTFYLEDWVFQKDYGNELLSTHFKVKNLKGFGVESLEQGIVAAGAA
MYYLSETQHNKIQHIQSISRIAEDNYVWMDRFTVKNLELYGGNALNSVSLLNVIDKTISP
MGGRLLKRWLALPLKDLTQIQERHELVAFLIDNESFFETVTYQLKQISDIERLISKVATG
KVSPREVILLKNSLKAILPIKASAEKSTNKTVKEIGKKLHDCEILITKIIKTIFEDAPVN
INKGNAIASGVSDELDELRSISNSGKEYLEMMLARETERTGITSLKIAFNNVFGYYIEVR
NTHKDKVPQEWIRKQTLVNAERYITEELKEYETKILGAEDKIQQIEADIFSKLVQFIIDF
VQPVQQNAQNIAKIDVLLSFAKLAMDNNYVRPEMDNSTDIDIKNGRHPVIEKQLPIGEEY
IANDVVLNRDTQQIIMITGPNMSGKSAILRQTALIVLLAQMGSYIPAKSARIGMVDKIFT
RVGASDNISMGESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYL
HEHPSKGKTLFATHYHELNEMTSSFKRIKNFNVSVKELKDSIIFLRKLVEGGSNHSFGIH
VAKLAGMPNLVITKAQKILKQLEANNAHKDVKEVKDVLKESQQEDMQMSFFQLDDPLLEE
VRDEILATNIDTLTPIEALMKLNEIKRMLIKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaaaaccgcaaaaaaggtaactccattgatgcaacaatacaacggaattaag
aaaaaatatcccgatgcaatgttactctttagagtcggagatttttatgaaacctttggt
gatgatgccgtaaaagcatccagtattttaggaattgttttaacaaaaagaagtgcagga
agcgccagtgaaattgcgttggcaggttttccgcatcattcgttaaatacctatttacct
aaattagtaaaatcgggtttaagggttgctatttgcgatcagttagaagatccgaagatg
actaaaagcatcgtaaaaagaggcgttaccgaattggttacaccaggggttgctttaaat
gatgaagttttacaagcaaaatcaaataactttttagccgccgtacattttggtaaaaaa
ttaataggaatttcttttttagatgtttctacaggtgagtttttaattgcccaaggaaac
caagaatatattgataaacttttacaaaatttttcgccaagcgaagttttagttgaaaaa
aaatacaaacaacaattttcagaattgtttacaaatcgttttcataccttttatttagaa
gattgggtttttcaaaaggactatggaaatgaattattaagtacgcattttaaggttaaa
aacttaaaaggttttggtgttgaatctttagagcaaggtattgttgctgctggtgcggca
atgtattatttatcagaaacacaacataataaaattcaacacatacaatcgatcagcaga
attgccgaagataattatgtttggatggataggtttaccgttaaaaacctagaattatac
ggcggaaacgctttaaattccgtctctttattaaatgtaattgataaaacaatttcgcct
atgggcggacgtttattaaaacgttggttggctttgcccttaaaagatttgacgcaaata
caagaacgtcatgagttggtcgcttttttaattgataatgaatctttttttgaaacggta
acctatcaattaaagcaaatttctgatatcgagcgattaatttcaaaagttgccacagga
aaagtatcgccaagagaagttattttattgaaaaattccttaaaagctattcttccgata
aaagcatccgcagaaaaaagcacgaataaaacagttaaagaaataggaaaaaaattacac
gattgtgaaattttaattactaaaatcatcaaaactatttttgaagatgcacctgtaaat
atcaataaaggaaatgctattgcaagtggtgtttctgatgaattagatgaacttcgtagt
atttctaattcaggaaaagaatatttagaaatgatgttggctcgtgaaaccgaaagaacg
ggaatcaccagtttaaaaattgcttttaataatgtttttggctattatattgaagttaga
aatacccataaagacaaagttccacaagaatggattcgtaagcaaacccttgtaaatgct
gagcgatatattaccgaagaactcaaagaatacgaaactaaaattttaggagcagaagat
aaaattcagcaaatagaagcggatattttttcgaaattagtgcagtttattattgatttt
gtacaacctgttcagcaaaatgctcaaaatattgctaaaatagatgtgttattatcattt
gccaaattggcgatggataataattatgtacgtccagaaatggataatagtaccgatatt
gacattaaaaatgggcgtcatcctgtaatcgaaaaacaacttccaattggcgaagaatat
atagccaatgatgttgttttaaatagagatacgcaacaaataattatgattaccggacca
aatatgtcgggtaaatctgcaattttacgccaaaccgcattgattgttttattagcacaa
atgggaagttatattcctgcaaaaagtgctagaattggtatggtagataaaatttttacc
agagttggcgcaagcgataatatttcgatgggagaatctacttttatggtagaaatgaac
gaaacagcatcaattttaaataatatatcggaacgtagtttggttttattagatgaaatt
gggcgtggaacttctacctatgatggaatttcaattgcttgggctattgccgaatattta
cacgaacatccatcaaaaggaaaaacgttatttgcaacgcattatcatgaattaaatgaa
atgactagcagttttaaacgtattaaaaactttaatgtatcggtaaaagaattaaaagat
agtattatttttttacgaaaattagtggaaggtggaagtaatcatagttttggaattcat
gtagcaaaattagcaggaatgccaaatttagtgattacaaaagcacaaaaaattctaaaa
caattagaagcaaacaacgctcataaagacgtaaaagaggttaaagatgttttaaaagaa
tcgcaacaagaagacatgcaaatgagcttttttcaattagatgatcctttattagaagaa
gttagagatgaaattttagccacaaatattgatacacttacgccaattgaagctttaatg
aaattgaatgaaattaagcgaatgcttattaaaaaatag
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