Tenacibaculum dicentrarchi: AUW17_01500
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Entry
AUW17_01500 CDS
T04208
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tdi
Tenacibaculum dicentrarchi
Brite
KEGG Orthology (KO) [BR:
tdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdi03016
]
AUW17_01500
Enzymes [BR:
tdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AUW17_01500
Transfer RNA biogenesis [BR:
tdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AUW17_01500
Prokaryotic type
AUW17_01500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Coilin_N
Motif
Other DBs
NCBI-ProteinID:
ALU74026
LinkDB
All DBs
Position
complement(348144..348839)
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AA seq
231 aa
AA seq
DB search
MKTVEDYQNGQVLLIDKPLEWTSFQVVNKLRWHIKQRFNIKKIKVGHAGTLDPLATGLLI
LCTGKKTKIIDQYQAQIKEYTGTITLGGTTPSYDLETQINETFSTDHITEELIHETTKQF
TGVIQQKPPIFSAIKKEGVRLYELARKGETTEIKTREITIPVFEITKIDGNNLDFRVVCS
KGTYIRSLAFDFGAALKSGAHLSKLRRTKIGDFHVDNAVSIDEFIKSLEKI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtagaagattatcaaaacggacaagttttattaattgataaacccctagaa
tggacgtcttttcaggtggtaaataaattgcgctggcacataaaacaacgctttaacatc
aaaaaaataaaagttgggcatgccggaactttagatccgttggcaacaggtttattaata
ctttgtacaggtaaaaaaaccaaaattattgaccaatatcaagcgcaaataaaagaatat
accggtacaattactttagggggaacaacgcctagttatgacttagaaacccaaataaat
gaaaccttttctacggatcatattactgaagaattgattcacgaaaccaccaagcaattt
acgggcgtaattcagcagaaaccacctattttttcggcgataaaaaaagaaggtgttcgt
ttatatgaacttgctaggaaaggagaaactaccgaaataaaaacaagagaaattaccatt
cctgtttttgaaatcaccaaaattgacggtaataatcttgattttagagttgtttgtagc
aaaggaacctacattcgttcgttagcttttgactttggagctgctttaaaatcaggtgct
catttatcaaaattaagaagaaccaaaattggagattttcatgtagataatgccgtaagt
attgatgaatttataaaatcattagaaaaaatttag
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