Tenacibaculum dicentrarchi: AUW17_02590
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Entry
AUW17_02590 CDS
T04208
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tdi
Tenacibaculum dicentrarchi
Brite
KEGG Orthology (KO) [BR:
tdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdi03016
]
AUW17_02590
Enzymes [BR:
tdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AUW17_02590
Transfer RNA biogenesis [BR:
tdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AUW17_02590
Prokaryotic type
AUW17_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ALU74220
LinkDB
All DBs
Position
complement(591271..592005)
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AA seq
244 aa
AA seq
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MRYFIELAYKGKNYHGWQIQPDAVSVQEKINKAISTVLRENISITGAGRTDAGVHASQMF
AHFDTDVVLTNKFAFRLNALLPDDIVIFNCKLVHNDAHTRFDASSRSYEYKIWLGRNPFS
LDTSWQLYNQKLDIELMNQAAEILYEHEDFECFSKVKSDVHTFNCDVTNAVWELNGNELT
FHISANRFLRNMVRAIVGTLIDIGTGKTTIDDFNKIIASKNRSNAGTSVPAKGLFLTKVV
YPYI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttattgaattagcgtataaaggaaaaaattatcatggttggcaaatacaa
cctgatgcagtttcggtacaagaaaaaataaacaaggctattagcactgttttaagagaa
aacataagtattacaggcgcaggaagaacagatgctggcgtacacgcatcgcaaatgttt
gcgcattttgataccgatgtggttttaaccaataaatttgccttccgattaaatgcactt
ttacctgatgatattgtaatttttaactgtaaattagtacacaatgatgcacatactcgt
tttgatgcaagtagcagaagttatgaatataaaatttggcttggtagaaatccgttttca
ttagatacctcttggcaattatataatcagaaattagatattgagttgatgaaccaagcc
gccgaaattttatatgaacatgaagattttgagtgtttttcgaaggtaaaatctgatgtg
catacctttaattgtgatgttaccaatgccgtctgggagttaaatggcaatgaattgaca
tttcatattagcgcaaatcgatttttaagaaatatggttcgtgccatcgttggtacttta
atcgatattggaacaggcaaaacaacaattgatgattttaataaaattatcgctagtaaa
aacagaagcaacgcaggaacatcagttccagcaaaaggattatttttaactaaagtagta
tatccctatatatag
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