Tenacibaculum dicentrarchi: AUW17_07980
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Entry
AUW17_07980 CDS
T04208
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tdi
Tenacibaculum dicentrarchi
Pathway
tdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUW17_07980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdi03400
]
AUW17_07980
Enzymes [BR:
tdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AUW17_07980
DNA repair and recombination proteins [BR:
tdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AUW17_07980
Prokaryotic type
AUW17_07980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALU75206
LinkDB
All DBs
Position
complement(1848659..1849324)
Genome browser
AA seq
221 aa
AA seq
DB search
MNDTILPIDWQNILKPEFEKTYFKDLSNFVDKEFTENTCYPKKENIFKAFNDCSFDALKV
VIIGQDPYHGIGQGNGLCFSVNQGIKHPPSLVNIFKELATDLQVSTPVSGDLSHWATQGV
LLLNATLTVREGEAGSHQKQGWEQFTDAVIQKISEEKQDVVFLLWGKFAEKKGSIINTEK
HTIFKAPHPSPLGAWRGWFGSKHFSKTNTFLKSVNQTPIKW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatacaatactacccatcgattggcaaaatattttaaagccagaattcgaaaaa
acatattttaaagatttatctaattttgttgataaagagtttactgaaaatacttgttat
cctaaaaaagaaaatatatttaaagcttttaatgattgttcttttgatgctttaaaagtg
gtaattattgggcaagatccatatcatggaatagggcaggggaatggtttgtgtttttcg
gtaaatcaaggaataaagcatccgccatcattggtaaatatttttaaagaactcgctaca
gatttgcaagtatcaacgcctgtttctggcgatttatcgcattgggcaactcaaggagtt
ttgttgttaaacgctacattaaccgttagagaaggcgaggcagggagccatcaaaaacaa
ggttgggaacaatttaccgatgctgttattcaaaaaatatccgaagaaaaacaagatgtt
gtgtttttgctttgggggaaatttgccgaaaagaaaggcagtattataaatacagaaaaa
catactatttttaaagcaccacatccatctcctttaggagcttggcgaggttggtttgga
agtaaacacttttcaaaaaccaatacatttttgaaaagtgtaaaccaaacacctataaaa
tggtag
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