Torulaspora delbrueckii: TDEL_0A01350
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Entry
TDEL_0A01350 CDS
T02236
Symbol
TDEL0A01350
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03015
mRNA surveillance pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TDEL_0A01350 (TDEL0A01350)
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0A01350 (TDEL0A01350)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0A01350 (TDEL0A01350)
03041 Spliceosome [BR:
tdl03041
]
TDEL_0A01350 (TDEL0A01350)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TDEL_0A01350 (TDEL0A01350)
mRNA cycle factors
Stress granule specific factors
TDEL_0A01350 (TDEL0A01350)
Spliceosome [BR:
tdl03041
]
Complex C
Other components
Complex C specific factors
TDEL_0A01350 (TDEL0A01350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RBD_DEAH11
RRM_occluded
RBD_RDR6
RRM_RdRP1_2
YflT
xRRM
DUF7975
Motif
Other DBs
NCBI-GeneID:
11503212
NCBI-ProteinID:
XP_003678678
UniProt:
G8ZLH3
LinkDB
All DBs
Position
1:complement(240288..242054)
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AA seq
588 aa
AA seq
DB search
MTDITEKTAEQLEQLNIQDEPQQNVAPASNEPESQKVETSSASLYVGELDPSVSEALLYD
IFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEKLNYAPIKGVPCRIMWSQR
DPSMRKKGSGNIFIKNLHPDIDNKALHDTFSVFGNILSCKIATDEAGNSRGFGFVHFEDD
EAAKEAIDAINGMLLNGQEVYVAQHVSKKDRQSKLDEAKANFTNVYVKNIHPDTGDEEFE
EFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEELNETDFKGQTLHVGRAQK
KHERLQELKKQYEAFRLEKLEKYQGVNLFVKNLDDTIDDQKLEEEFAPYGTITSVKVMRS
ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQ
MRYQQVTAAAAAAAAGMRGQFMPPMFYGVMPPRGVPFNGPNPQQMAAMGGMPKNGVPPQQ
FRNGPVYGVPPQGAPQQGQFMRNGAGANQFYQQKQRQVLGEQLYKKVFAKTSDEEAAGKI
TGMILDLPSQEVVPLLESDELFDQHFKEAFAAYESFKQEQEQEQQPQN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatcactgaaaagaccgctgagcaattggaacagttgaacatccaagatgaa
ccacaacaaaatgttgctccagcttccaatgagccagaaagtcaaaaagttgaaacttcc
tcagcttctttgtacgttggtgaattagacccatcagtctctgaagccctattgtacgat
attttctctccaatcggttctgtttcttccattcgtgtttgccgtgatgccatcacaaag
acctctttgggttacgcttacgtgaacttcaatgatcacgaagctggtaagactgcgatt
gaaaaattaaactatgctcccatcaagggcgtcccatgccgtatcatgtggtcccaacgt
gatccctcgatgagaaagaagggttctggtaacatctttatcaagaacttgcatccagat
attgacaacaaggctttgcacgataccttctcagtcttcggtaacattttgtcctgtaag
attgccaccgatgaagctggtaactccagaggtttcggttttgttcattttgaagatgac
gaagctgccaaggaggctatcgacgccattaacggtatgttgttgaacggacaagaagtc
tatgttgctcaacacgtttccaagaaggaccgtcaatccaaattggacgaagctaaggcc
aacttcaccaacgtttacgttaagaacattcatcctgacactggtgacgaagaatttgaa
gagttcttcaccaaggtgggcccaatcacctctgctcatttagaaaaggataacgaaggt
aaattgagaggtttcggttttgttaattacgaaaaccataacgatgccgccaaagccgtc
gaggaattgaatgagaccgacttcaagggtcaaactttgcatgttggtcgtgctcaaaag
aagcatgaacgtttgcaagagttgaagaaacaatacgaagctttcagattggagaaattg
gaaaaataccaaggtgttaatttatttgtcaagaacttggacgacaccatcgatgaccaa
aaattggaagaggaatttgccccatatggtaccatcacttctgttaaagttatgagatcc
gagaacggtaaatccaagggtttcggttttgtttgtttctctaccccagaagaagctact
aaggctatcaccgaaaagaatcaacaaatcgttgctggtaagccattgtatgttgccatt
gctcaaagaaaggatgttagacgttctcaactagctcaacaaattcaagctagaaaccaa
atgagataccaacaagtcactgctgccgctgccgctgccgctgccggcatgcgtggtcaa
ttcatgccaccaatgttctacggtgtcatgcctccaagaggtgtcccattcaatggtcca
aacccacaacaaatggctgctatgggtggtatgccaaagaacggtgtcccaccacaacaa
ttcagaaatggtccagtttacggtgtccctcctcaaggtgctccacaacagggtcagttc
atgagaaacggtgctggtgccaaccaattttaccaacaaaagcaaagacaagtcttgggt
gaacaactatacaagaaggtctttgccaagacttctgacgaagaagctgctggtaagatc
actggtatgatcctagatttgccatcccaggaagttgtcccattgttggaaagcgacgaa
cttttcgaccaacatttcaaagaagcattcgctgcttatgaatccttcaagcaagaacaa
gaacaagaacaacaaccacaaaactaa
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