Torulaspora delbrueckii: TDEL_0A03830
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Entry
TDEL_0A03830 CDS
T02236
Symbol
TDEL0A03830
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TDEL_0A03830 (TDEL0A03830)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0A03830 (TDEL0A03830)
03041 Spliceosome [BR:
tdl03041
]
TDEL_0A03830 (TDEL0A03830)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TDEL_0A03830 (TDEL0A03830)
Spliceosome [BR:
tdl03041
]
Complex B
Other components
Prp19-related factors
TDEL_0A03830 (TDEL0A03830)
Complex C
TDEL_0A03830 (TDEL0A03830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
Mad3_BUB1_I
TPR_2
TPR_19
TPR_8
TPR_4
TPR_12
TPR_MalT
TBPIP_C
TPR_16
Motif
Other DBs
NCBI-GeneID:
11503146
NCBI-ProteinID:
XP_003678926
UniProt:
G8ZM71
LinkDB
All DBs
Position
1:678643..681060
Genome browser
AA seq
805 aa
AA seq
DB search
MDDISRYVADEDDLAFEYELQRTPQSVVTWRRYLDSWKEDGRPDSHIVWLYERFCRQFQS
DMEIWEDYIQWLLQRCGKSVEYTDIMELFIRSLSYCAKNCEDLCIMFLEFAIGQLDLKYI
RMAFDISLKRLPRDGHGRVWEKVLRFIDETLSPLTRNEETEYDDIFEELSILIYKGLFEK
TDEGNHELDLWTSLILKRYLDVCPSEQRPLNVIRIAQTGDHDFLYTAYRKFYGNGPQSTL
PYSTNLLYLESLESLNKREAYEQFITELAGVFPENWVELKVTLVKFYIKSAQHDKIVHVL
EDSLARTQSVQEFSVLYSTYLNYEKAFIDIVLQELKNNSQVIGDWEQQVESHLSRLQGLI
ESYEIRLNDIKIRRNPNLVSNWSERATLFPAAAGKCDVYSHAILTIDPYRVNIPGSLGKL
WCAYAELYWEAGDFDSAREVYDRGLRVPYPYLQDLEELWTTWAEHELESFSIEFAIKLME
DALQVPENPELLVDRFKEGDKKVPAQAVVFTSLKLWLLYLDFTESLSYDSSEYTEKTIAL
YEQMIALKVATPMVFINYAHFLQEHREELSSFQVYERAIGTFPPETQLEIWDLYLTEGTA
EDSPLAKEQIRDLFDQALENLTNGRIDCKTIFLLYSDFEEQCGLLNRCCEILLQGARKTA
NLEDKITLWQMCISKAKALLGNEESRKLYEECIQSLPNSQVMKFVVDFARTEAVLGEIER
ARELFKYGAQLLPPGRNGLLWEKWDEFEVRNGNKESYKDMLKLKRKLEKEMRIETEAESQ
LEGNIAFVAASKQNVVNPEEIELNI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatgatattagtcgatatgtggctgatgaggacgatttagcgtttgaatacgaattg
caacggactccgcagagtgtagttacatggagaaggtacttggatagctggaaggaggat
gggagacctgatagccatattgtttggctttacgaacggttctgtcgccagtttcaaagt
gatatggaaatttgggaggattatatacagtggttgctccaaagatgtgggaaaagtgtg
gaatatacagatattatggaactattcatacgaagcctatcttattgtgctaagaattgt
gaagacttgtgcataatgtttttggagtttgcaataggtcaattggatctgaaatatatc
aggatggcattcgacatttcgctcaagagacttccgagagacggtcatgggcgtgtttgg
gagaaagtactgcgattcattgacgagactttgtccccattgactcgcaatgaggaaacg
gaatatgatgatattttcgaggaattgagtatcctcatttacaaaggactatttgaaaaa
actgatgaggggaatcatgaattagatctgtggacatcgcttatcctgaagagatacttg
gatgtatgtccaagcgaacagagacccttgaatgtgattcgaatagcacaaacgggtgat
catgactttctctatacagcataccgcaagttttatggcaatggacctcagtcaacgctc
ccgtactctactaatctcctgtaccttgagtcattggaatccctgaataaaagagaagcg
tacgaacaatttatcaccgagttggccggagtattccctgagaactgggtcgaattgaaa
gtaacacttgtcaaattctacatcaagtcagcgcaacacgataagatagttcacgtgttg
gaagattctttggccaggactcagagtgtccaggaattttctgtgctctatagcacatac
ctgaactatgagaaagcatttatcgacatcgttctgcaggagttaaaaaataactcacaa
gtcatcggtgattgggaacagcaagttgaaagtcatctgagtcggcttcaaggtcttatt
gagtcgtatgagatacggctcaatgatattaagatcaggagaaatcccaatttggttagc
aattggtcggagagagcgactctgtttcccgcggctgctggaaagtgtgatgtatactcg
cacgctatactgaccatcgatccttatagagttaacattcccggttctctcggcaagcta
tggtgtgcttacgcggagctttattgggaagcaggagatttcgatagtgctcgcgaagtt
tatgatcgaggactcagagtaccttatccatacctacaagaccttgaggagctatggaca
acatgggctgaacatgaattggaaagcttttcaatagaatttgccattaagctgatggaa
gacgctttgcaagttcctgagaatcctgagctattagtggatagattcaaagaaggagac
aagaaagtacccgcgcaggctgtggttttcacctctttgaaactctggttgttatacttg
gattttacagagtctctttcttatgattcttcagagtacaccgaaaagaccattgcactt
tatgaacaaatgattgcgttaaaggtggcgacaccgatggtgttcataaactacgcacat
ttcttgcaagaacatagggaagagctttctagtttccaagtttacgaacgtgcaattgga
actttcccaccagaaacacaacttgagatatgggatctgtacttgacagaagggaccgct
gaagacagtccccttgcaaaagagcaaatcagagatttgttcgatcaggcactagagaac
ttgaccaatggaagaattgattgtaaaactattttccttttgtacagtgattttgaggag
caatgtggtctgctaaatagatgttgtgaaatcctcttgcaaggcgccagaaagacagcc
aatctggaagacaagataaccttgtggcaaatgtgcatctctaaagcaaaagcactgttg
ggtaacgaagaatcacggaaattgtatgaagaatgcatccaatctttacctaattctcaa
gtaatgaaattcgttgtggactttgcaagaacagaagcggttcttggggaaatcgagaga
gcaagagaactcttcaaatacggtgcccagctcctaccaccaggaaggaatggtcttcta
tgggaaaaatgggacgagtttgaagtaagaaatggtaataaggagagctacaaggacatg
ttgaaactcaaaagaaaattggagaaggaaatgcggattgagaccgaagctgaaagtcaa
ttggaaggtaatattgcctttgttgccgcttcaaaacagaacgttgttaatccggaagaa
atagagttgaatatatag
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