Torulaspora delbrueckii: TDEL_0A05590
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Entry
TDEL_0A05590 CDS
T02236
Symbol
TDEL0A05590
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tdl
Torulaspora delbrueckii
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0A05590 (TDEL0A05590)
03041 Spliceosome [BR:
tdl03041
]
TDEL_0A05590 (TDEL0A05590)
03036 Chromosome and associated proteins [BR:
tdl03036
]
TDEL_0A05590 (TDEL0A05590)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TDEL_0A05590 (TDEL0A05590)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TDEL_0A05590 (TDEL0A05590)
mRNA cycle factors
Common to processing body (P body) and stress granule
TDEL_0A05590 (TDEL0A05590)
Spliceosome [BR:
tdl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TDEL_0A05590 (TDEL0A05590)
Chromosome and associated proteins [BR:
tdl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TDEL_0A05590 (TDEL0A05590)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
11503223
NCBI-ProteinID:
XP_003679102
UniProt:
G8ZMP7
LinkDB
All DBs
Position
1:980392..982185
Genome browser
AA seq
597 aa
AA seq
DB search
MADLSKKVENMSIKEKGGYVPPHLRNGGARRANSGGFGGSSGSDGSSGGSFFGFSGRRGD
SNRGGRGGFARNGGGSGFRPAGTGRWTDGKHVPAARNEKMEQQLFGVAEDPNFQSSGINF
DHYDDIPVDASGENVPEPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVANGRDL
MACAQTGSGKTGGFLFPVLSESFSTGPSEIPENARGGYMRKAFPTAVVLAPTRELATQIF
DEAKKFTYRSWVRATVVYGGADVGSQMRELDRGCDLLVATPGRLNDLLERGKISLAKVKY
LVLDEADRMLDMGFEPQIRHIVEGCDMPGVEDRQTLMFSATFPVDIQHLARDFLSDYIFL
SVGRVGSTSENITQHVLYVEDEDKKSALLDLISSATDGLTLIFVETKRMADQLTDFLIMQ
NFAATAIHGDRTQGERERALAAFRSGKANLLVATAVAARGLDIPNVTHVINYDLPSDVDD
YVHRIGRTGRAGNTGVSTAFFNRGNKNIVKGLVEILTEANQEVPSFLNDISRESSGIRGG
RGGSFFNSRANSSRDYRKQGNGNGSFGASRGSGGSSWGSSRGGSSWGESSGGNSSWW
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttaagtaagaaagtagagaacatgagtatcaaggagaaaggcggttacgtt
cctccacatttgagaaacggtggagcgcgtcgtgccaacagtggtggattcggtggatct
agtggttctgatggttcttctggtggtagtttctttgggtttagcggtcgtcgtggagat
tccaaccgtggaggacgcggtggattcgctagaaacggcggtggcagcgggttcagacca
gctggtactggtagatggacggacggtaagcacgttccagctgcgagaaatgaaaagatg
gaacagcagttgtttggtgttgcagaagatccaaatttccagtcttccgggattaacttt
gaccactatgatgatattccagtcgatgcatctggtgagaacgttccagaacctattact
gagtttacaagtcctcctttggatgaactattgttggaaaacatcaagttggctagattc
actaagcctactccagttcaaaagtattccgtgcctattgtggctaacggtagagatttg
atggcctgtgcgcagactggttccggtaagaccggtgggttcttgtttcctgtgttgtct
gaatctttcagcactggtccttctgagattccagagaatgctcgtggtggttacatgaga
aaggccttcccaacagctgttgtgttggctccaactagagagttggctacacagatcttc
gacgaggccaagaagtttacttacagatcgtgggttagagctaccgttgtgtacggtggt
gccgacgttggttctcaaatgagagagttggaccgtggttgtgatctgctggttgctact
ccaggtcgtttgaacgatctgttggagcgtggtaagatctctttggccaaggttaagtat
ttggttttggatgaagctgatagaatgttggatatgggtttcgaacctcagatcagacat
attgtggaaggttgtgatatgccaggtgtcgaggacagacagacactgatgttttcggct
actttcccagtcgatatccagcatttggctcgtgatttcctaagtgactacattttctta
tccgtcggtagagttggttctacatcggagaacattactcagcatgttctatacgtcgaa
gacgaggacaagaaatctgcattgttggatctaatttcctcagctaccgatgggttgact
ttgatctttgtcgaaactaagagaatggcagaccaattgacagatttcttaattatgcaa
aatttcgctgctaccgctattcacggtgatcgtacccaaggcgagcgtgaacgtgcgcta
gcggctttcagatccggtaaagctaacttattggtcgctactgcagttgcagctagaggt
ctggatattccaaacgtcactcacgttatcaactacgatttgccaagtgatgtcgatgat
tacgttcacagaatcggtagaactggtcgtgccggtaacaccggtgtctccactgctttc
tttaacagaggtaacaagaacatcgtcaaaggtttggtcgaaattttgaccgaggcaaac
caagaggttccttccttcttaaacgacatttccagagaatcctccggtattagaggtggc
agaggcggtagtttcttcaacagccgtgcaaatagctccagagattaccgtaagcaaggt
aacggtaatggttccttcggtgcctccagaggcagcggtggtagcagctggggctcttcc
agaggtggtagctcttggggtgaatcctccggtggtaactcatcctggtggtga
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