Torulaspora delbrueckii: TDEL_0B02780
Help
Entry
TDEL_0B02780 CDS
T02236
Symbol
TDEL0B02780
Name
(RefSeq) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03008
Ribosome biogenesis in eukaryotes
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TDEL_0B02780 (TDEL0B02780)
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0B02780 (TDEL0B02780)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdl03021
]
TDEL_0B02780 (TDEL0B02780)
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0B02780 (TDEL0B02780)
03009 Ribosome biogenesis [BR:
tdl03009
]
TDEL_0B02780 (TDEL0B02780)
03016 Transfer RNA biogenesis [BR:
tdl03016
]
TDEL_0B02780 (TDEL0B02780)
Transcription machinery [BR:
tdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TDEL_0B02780 (TDEL0B02780)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
TDEL_0B02780 (TDEL0B02780)
Ribosome biogenesis [BR:
tdl03009
]
Eukaryotic type
Pre-60S particles
RNases
TDEL_0B02780 (TDEL0B02780)
Transfer RNA biogenesis [BR:
tdl03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
TDEL_0B02780 (TDEL0B02780)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
11504328
NCBI-ProteinID:
XP_003679618
UniProt:
G8ZP63
LinkDB
All DBs
Position
2:495985..499077
Genome browser
AA seq
1030 aa
AA seq
DB search
MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVTLPIDYAAPNPNGELDNLYLDMNGIVHP
CSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRFRS
ARDAQVENEAREQVMREREQVGEFIDDSVKNKKTWDSNAITPGTPFMDKLAAALRYWISF
KLSTDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCIYGLDADLIFLG
LATHEPHFKILREDVFAQNNRKRHNFTDSLNMTEEEKQLIAKQDSEKPFLWLHISVLREY
LAAELWVPKLSMPFNLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDIWKVVLP
SLKSYMTCDGELNLQSVEMLLGQLGAREGDIFKTRHIQEVRKQEAIQRRKLQRNVSKGQD
RHPTVPSEQLQLYDTNGQLAAGSWNLTTHDMVNFKKEIMLANEGDPEAIAIVKAHRDRND
KLMEEISTQDMEKVVNDANKANYSVADAMKKKLMAKKRKLEQEEEAERAAKKNTSKKMDG
QAQAGQELDKEIKAEVIQEVEEEDDNDDDDGGNDVEGKAVKGEESVPIVSSGGIRSGVFD
SDVEVKLYEPGYRERYYVAKFNIKESEIEALRKDLVRRYVEGVSWVLAYYYQGCASWDWY
YPYHYAPFASDFFGIADMKVEFEEGEPILPYEQLMSVLPAASAHTLPSIFKPLMSEPDSE
IIDFYPTEFPIDMNGKKMSWQGIALLPFIEAKRLLRVVRNQYSRLTEYERSRNVCKEPVL
LISNKNVNYEKFAKRLFKEPADGVDLKFQHFKSGLSGIVSTDVENFQLNSKVQCPLESGS
LPELSTNLFLKMAYKLLPLPNKNKSVILNGFIPPEALLTPYDLDAILYKYNNHQNNNRSG
PWNFENDMRQNKVPVGPSGTTQYKPRVGGFRSFFYFSQMNNTTNYNGQYNNNVPQPRVNN
GMQSRYSNENRNGNYQRSQYNPNQSRYNNDNNKMGRNFNQQGRQYGGNNAGRRYQGSNRE
PYNAANYSRR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccatcctttttcagatggctttcgaggaaatatcccaaaattatatcgcca
gttcttgaagaacagccgcaagtagtggacggtgtgacattacctattgattatgcagct
ccgaatcctaatggtgagctggataatttatacctggatatgaatggtattgtacatcca
tgttcgcacccggaaaataaacctccaccagaaactgaagatgagatgttactcgcggtg
ttcgagtataccaatcgtgtccttaatatggctagacccagaaaagtacttatgatagcc
gtggatggtgtggctcctcgtgccaagatgaaccaacaaagatctcgtagattcagaagt
gccagagacgcacaagtggaaaatgaggcccgggaacaggtaatgagggaacgtgaacag
gttggagaatttattgacgactcagtaaaaaacaagaaaacttgggattctaatgctatc
actccagggactccttttatggacaaattggcagctgcgttacggtattggatctcattc
aaattatcgacggatcctggttggaaaaatttacaggttattataagtgatgctacagtc
cctggtgaaggtgaacataagatcatgaattttgttcggtcacaacgtgctgatccacaa
tacaatccaaacacaacgcattgtatatacggtttagacgctgatttgatctttttaggt
ttagcaactcatgaaccacatttcaagattctgagagaagatgtttttgctcaaaacaac
cgtaagaggcataatttcacggattccttgaacatgacagaagaagaaaaacaattgatc
gctaaacaggattctgagaagccgtttttatggttacacataagtgtcttgagagaatac
cttgcggctgaactatgggtgccgaagctttctatgcctttcaatttggagcgtgccatt
gacgattgggttttcatgtgtttcttctgtggtaatgatttcttacctcatttacctagt
ctagacgtcagagaaaacagtattgacattttactggatatatggaaggtagttttgcct
agtctcaaatcttacatgacttgtgacggggaactgaatctacagtccgtggagatgttg
ttaggacaattaggtgctcgtgaaggtgatatcttcaagacgaggcacatccaagaggtc
agaaaacaggaagctattcagaggagaaaattgcaaaggaatgtttccaaaggtcaggat
aggcatccaactgtccccagcgaacagttgcaactgtatgatactaatggtcagctagca
gcgggctcttggaaccttacaacccatgatatggtcaactttaaaaaggaaattatgctc
gcaaatgagggagatcccgaggcgatagccatagtcaaggcacacagggataggaatgac
aaattgatggaagagattagcactcaagatatggagaaagttgttaacgacgcaaataaa
gctaattactcggtggctgatgcgatgaagaagaaattgatggcgaaaaagcgtaaacta
gagcaagaagaagaagctgaacgtgctgccaagaagaatacttctaaaaaaatggacggg
caagcgcaagctggacaagaattagacaaggaaataaaagcagaggttatacaggaggtt
gaagaagaggatgataatgacgacgatgacggtggcaatgacgtagaggggaaagccgtg
aaaggagaagagtcggttccaatagtttcctcgggtggaatccgcagcggagtgtttgac
agcgatgttgaagtgaaactctatgagccaggttatagagagaggtattatgtggccaaa
tttaacatcaaggagagtgagatagaagctttgcggaaagatttggtaaggcgttatgtt
gagggtgtttcatgggtcttggcatactattatcaaggctgtgcttcatgggattggtac
tacccatatcattatgcaccatttgcttctgatttcttcggaatagctgacatgaaggtc
gaatttgaggagggtgaacctattttaccctatgagcaattgatgagtgttttgcctgcg
gcttctgctcacactctaccttcaattttcaagccgttgatgagtgagccagattcggag
attattgacttctacccaaccgaatttccgatcgatatgaatggtaaaaagatgtcgtgg
caggggatagctttactgccgtttatagaggctaaacggctgttaagagttgtcagaaat
cagtattctcgcctgaccgagtatgaaaggtcaagaaatgtttgcaaggaacccgtcttg
ttaatcagcaacaagaacgttaactatgagaagttcgctaaaaggctattcaaggaaccg
gctgacggcgtagacttgaagtttcaacatttcaaaagtggcttaagtggtattgtttct
actgatgtagaaaacttccaattgaacagcaaagttcaatgtcctttagagagcgggtca
ttacctgaactttctacaaatctattccttaagatggcatataaactgttgcctctgccc
aacaagaataaatctgttattctcaacggcttcattcctcccgaggcacttttgacaccg
tatgacttggatgccatcttatacaagtacaataatcatcaaaacaacaatcgctcaggg
ccctggaattttgaaaatgatatgagacaaaataaagtacctgtggggcccagcggtacg
actcagtacaagccaagggtaggcggttttagatcgtttttttacttcagtcagatgaat
aataccacgaactataatggtcaatataacaacaatgtgcctcaaccaagagttaacaac
ggaatgcaaagtagatattccaatgagaacagaaatggcaattatcaacgaagtcagtat
aacccgaaccaaagccgatataacaatgacaataacaaaatgggacgtaattttaatcaa
caaggaagacaatacggtgggaacaatgctggaagaaggtatcagggttcgaatcgagaa
ccttataacgcggcaaattattcacgcagataa
DBGET
integrated database retrieval system
