Torulaspora delbrueckii: TDEL_0C01160
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Entry
TDEL_0C01160 CDS
T02236
Symbol
TDEL0C01160
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tdl
Torulaspora delbrueckii
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdl03009
]
TDEL_0C01160 (TDEL0C01160)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TDEL_0C01160 (TDEL0C01160)
Ribosome biogenesis [BR:
tdl03009
]
Eukaryotic type
Pre-60S particles
Helicases
TDEL_0C01160 (TDEL0C01160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
11500340
NCBI-ProteinID:
XP_003680216
UniProt:
G8ZR63
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All DBs
Position
3:complement(198802..200613)
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AA seq
603 aa
AA seq
DB search
MAESLSWEQLNYPVQDWIQRAIEVLGFDAMTPVQASTIPLFSRNKDVVVESVTGSGKTVA
FVVPILERIISDGANSTAFKKGHFHSLIVTPTRELSNQIQSVIQSFLDHYPGDSYPIKSQ
LLVGTSQKTVRDDVTKFLEERPQILVGTPGRVLDFLQMPSVKTLSCNMVVLDEADRLLDS
DFFKDVEKILRTLPKQRRTGLFSATISEAGNQIFKTGLRNPVKVTVNSSKKGPASLGLFY
TVIDPQEKLLQLINILNNYKFKKCIAYFPTCISVTFFYSFLQYLQREKKLLSDEVMVYSL
HGKLQTASRMKTLENFTDTVNKAVLLTTDVAARGIDISDVDLVVQLDPPTDTSVLLHRCG
RTGRANRIGKAITFINEGREEDLIPFLEVKDVHLQKMTLKKDELLKEGIYEVFKEWILQD
RARFDLSVRSYVAFIKYYSKHSASSIFRLQSLDYVGLAKMYGLFRLPRMPEITKYFKSDT
IKDGWLVDQPIDMDRFAYKDKKHEAARLEKLKDLENIKDKKKLKFELKKKNMAWSNKTES
KETKAERKMKVELKRKAIEEQIEKEEGNARDEVTEDWKDIVLKNKKRKQMQSSGGMQGSF
DDL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatccttatcatgggagcaactcaattatccggtacaggattggatccagagg
gcgatagaagtactaggatttgatgctatgacgccagttcaagcatctaccataccactg
ttttcacggaataaagatgttgttgtggagtcggttacagggtcaggaaagaccgttgct
tttgtagttccaattttggaaagaatcatctcagatggcgcaaattccactgcgttcaag
aaaggccattttcattcattgatcgtcacacctactcgtgagttatcaaatcagattcag
tcagtgatccagtcgttcttggatcactacccgggcgattcatatcctataaagtctcaa
cttctagtgggcacaagccaaaaaactgtgagagatgacgttacaaaattccttgaagaa
aggccgcaaattctagtcggaacaccagggagggtcctagactttttacagatgccatcc
gttaaaacattatcatgtaatatggtagttcttgatgaagcagatcggcttctagacagt
gatttcttcaaagatgtggaaaaaatattacgaacactaccgaagcaaagaagaactggt
cttttctcggctactattagcgaagctggtaatcaaattttcaagacaggtctaaggaac
ccagttaaagtcacagtgaactcgagtaaaaaagggccggcatctttaggtcttttctat
acggtgattgaccctcaggaaaaattactacaactgatcaacattttgaacaactacaaa
ttcaagaagtgcatcgcttatttccctacatgcatatcggtgacattcttttactctttc
ttgcaatacttgcaaagagagaagaaacttttgagcgatgaagtcatggtttactcgcta
catggaaagctacagacagcctcaagaatgaaaacactagaaaatttcactgatacagtt
aataaggctgtgttattgacgactgatgtggcagccagagggattgatatctctgacgtt
gacttagttgtgcagctggacccgccaacagatacaagcgtacttctacacagatgtggg
aggacaggaagagcgaatagaattggtaaagcgatcacttttataaacgagggcagagaa
gaggatcttattccattcctggaagtgaaagatgttcacttacaaaagatgacactgaag
aaagatgaattacttaaggaaggaatttatgaagtgtttaaagaatggatattgcaggat
agagcaaggtttgaccttagcgttagatcttacgttgccttcatcaaatattactcaaag
cattcagccagctcaatttttagacttcaatcactagattatgtgggtttggcaaaaatg
tatggtttattccgtttaccccggatgcctgagataacgaaatacttcaagagcgatacg
atcaaagatggatggctcgtcgaccagcccatcgacatggatcgttttgcgtataaggat
aagaaacacgaggctgcaagattggaaaaactgaaggacctggagaacataaaagacaag
aagaaactcaaattcgagctgaagaagaaaaacatggcatggtccaataagactgagagt
aaggagacaaaggccgagaggaagatgaaagttgaattgaagaggaaagcgattgaagaa
caaattgaaaaggaagaaggaaatgcacgagacgaagttaccgaagattggaaggatata
gtgctgaagaataaaaagaggaaacagatgcagagtagcggtggaatgcagggaagtttc
gatgacttgtga
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