Torulaspora delbrueckii: TDEL_0C02100
Help
Entry
TDEL_0C02100 CDS
T02236
Symbol
TDEL0C02100
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0C02100 (TDEL0C02100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0C02100 (TDEL0C02100)
03036 Chromosome and associated proteins [BR:
tdl03036
]
TDEL_0C02100 (TDEL0C02100)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TDEL_0C02100 (TDEL0C02100)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TDEL_0C02100 (TDEL0C02100)
mRNA degradation factors
5'-3' decay
Decapping complex
TDEL_0C02100 (TDEL0C02100)
Chromosome and associated proteins [BR:
tdl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
TDEL_0C02100 (TDEL0C02100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Arcadin_1
Phage_integrase
Motif
Other DBs
NCBI-GeneID:
11500434
NCBI-ProteinID:
XP_003680310
UniProt:
G8ZRF7
LinkDB
All DBs
Position
3:complement(362760..364199)
Genome browser
AA seq
479 aa
AA seq
DB search
MSDDQSWKAQLNLPKRDTRPQTDDVLNTKGNSFEDFYLKRELLMGIFEAGFEKPSPIQEE
SIPVAIAGRDILARAKNGTGKTAAFVIPALEKVKPKLNKIQALIMVPTRELALQTSQVVR
TLGKHCGVSCMVTTGGTNLKDDIMRLNETVHILVGTPGRVLDLASRKLADLSECSLFIMD
EADKMLSRDFKTIIEQILIFLPQSHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTL
KGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHA
RMRQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSG
RFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVADDASAVPVPFPIQQQ
HQQSQQQVHQQQYMPPQQQQQAMPPQHGYPMQGIPQQGIPPQGIPPPQMQAHFAAQPQY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaccaatcttggaaagcacagttgaaccttcccaagagagataccaggcct
cagactgatgatgtgctcaatactaaaggtaactcattcgaggatttctatttgaaaaga
gaacttttgatgggtattttcgaagccggtttcgaaaaaccttcgccaattcaagaagaa
tctattcctgtggctattgctggtagggatatcttggctagagcaaagaatggtaccggt
aagactgctgcttttgtgattcctgcgttggaaaaggttaaacccaaattgaacaagata
caggccttaatcatggtcccaacgagagaacttgcattacaaacgtctcaggttgtacgt
acattgggtaagcattgtggcgtgtcatgtatggtgaccactggtggtaccaatttgaag
gatgatattatgaggttaaatgaaactgtacatattctagtgggaactcccggtagagtg
cttgatttggcttctagaaaactggccgatctaagtgagtgttcccttttcattatggat
gaagcagataagatgttgtcgcgtgatttcaagacaattatcgaacaaatcttgatcttc
ctgcctcaatcacaccaatctttgctatttagtgctactttccccctaacggtgaaggag
ttcatggtgaaacatttacacaagccttatgagattaacttgatggaagaattgactctt
aaaggtataactcagtactacgcttttgtcgaagagagacaaaaattacactgtctcaat
actctgttctcaaaattgcaaatcaaccaggccatcatcttttgtaactccactaaccgt
gttgaattactggccaagaagattacagatctaggttactcttgttattactcacacgcc
agaatgagacagcaggaaagaaacagagtgttccacgaatttcgtcaaggtaaagttcgt
actttggtgtgttctgatctactgactcgtggtatcgatattcaggcagtcaacgtggtt
ataaattttgatttcccaaagaccgcagagacctatctacatagaatcggtagatctggt
agatttggtcatttgggtttagcgattaacttgatcaactggaatgaccgtttcaacctt
tacaagatcgagcaggaacttggtaccgagattgcagctatcccagcaaccattgacaaa
tctctgtatgtggcagatgacgcgtctgctgtaccagttccatttccaatacagcaacag
catcagcaatcgcagcagcaggtacatcaacagcaatacatgccaccacaacagcagcag
caagcgatgcctccacaacatgggtatcctatgcagggaattccccagcaaggcatccct
cctcagggtatacctccccctcaaatgcaagcacatttcgctgctcagcctcagtattga
DBGET
integrated database retrieval system
