KEGG   Torulaspora delbrueckii: TDEL_0C02100
Entry
TDEL_0C02100      CDS       T02236                                 
Symbol
TDEL0C02100
Name
(RefSeq) hypothetical protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
tdl  Torulaspora delbrueckii
Pathway
tdl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TDEL_0C02100 (TDEL0C02100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdl03019]
    TDEL_0C02100 (TDEL0C02100)
   03036 Chromosome and associated proteins [BR:tdl03036]
    TDEL_0C02100 (TDEL0C02100)
Enzymes [BR:tdl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TDEL_0C02100 (TDEL0C02100)
Messenger RNA biogenesis [BR:tdl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     TDEL_0C02100 (TDEL0C02100)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     TDEL_0C02100 (TDEL0C02100)
Chromosome and associated proteins [BR:tdl03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    TDEL_0C02100 (TDEL0C02100)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Arcadin_1 Phage_integrase
Other DBs
NCBI-GeneID: 11500434
NCBI-ProteinID: XP_003680310
UniProt: G8ZRF7
LinkDB
Position
3:complement(362760..364199)
AA seq 479 aa
MSDDQSWKAQLNLPKRDTRPQTDDVLNTKGNSFEDFYLKRELLMGIFEAGFEKPSPIQEE
SIPVAIAGRDILARAKNGTGKTAAFVIPALEKVKPKLNKIQALIMVPTRELALQTSQVVR
TLGKHCGVSCMVTTGGTNLKDDIMRLNETVHILVGTPGRVLDLASRKLADLSECSLFIMD
EADKMLSRDFKTIIEQILIFLPQSHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTL
KGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHA
RMRQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSG
RFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVADDASAVPVPFPIQQQ
HQQSQQQVHQQQYMPPQQQQQAMPPQHGYPMQGIPQQGIPPQGIPPPQMQAHFAAQPQY
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgagtgacgaccaatcttggaaagcacagttgaaccttcccaagagagataccaggcct
cagactgatgatgtgctcaatactaaaggtaactcattcgaggatttctatttgaaaaga
gaacttttgatgggtattttcgaagccggtttcgaaaaaccttcgccaattcaagaagaa
tctattcctgtggctattgctggtagggatatcttggctagagcaaagaatggtaccggt
aagactgctgcttttgtgattcctgcgttggaaaaggttaaacccaaattgaacaagata
caggccttaatcatggtcccaacgagagaacttgcattacaaacgtctcaggttgtacgt
acattgggtaagcattgtggcgtgtcatgtatggtgaccactggtggtaccaatttgaag
gatgatattatgaggttaaatgaaactgtacatattctagtgggaactcccggtagagtg
cttgatttggcttctagaaaactggccgatctaagtgagtgttcccttttcattatggat
gaagcagataagatgttgtcgcgtgatttcaagacaattatcgaacaaatcttgatcttc
ctgcctcaatcacaccaatctttgctatttagtgctactttccccctaacggtgaaggag
ttcatggtgaaacatttacacaagccttatgagattaacttgatggaagaattgactctt
aaaggtataactcagtactacgcttttgtcgaagagagacaaaaattacactgtctcaat
actctgttctcaaaattgcaaatcaaccaggccatcatcttttgtaactccactaaccgt
gttgaattactggccaagaagattacagatctaggttactcttgttattactcacacgcc
agaatgagacagcaggaaagaaacagagtgttccacgaatttcgtcaaggtaaagttcgt
actttggtgtgttctgatctactgactcgtggtatcgatattcaggcagtcaacgtggtt
ataaattttgatttcccaaagaccgcagagacctatctacatagaatcggtagatctggt
agatttggtcatttgggtttagcgattaacttgatcaactggaatgaccgtttcaacctt
tacaagatcgagcaggaacttggtaccgagattgcagctatcccagcaaccattgacaaa
tctctgtatgtggcagatgacgcgtctgctgtaccagttccatttccaatacagcaacag
catcagcaatcgcagcagcaggtacatcaacagcaatacatgccaccacaacagcagcag
caagcgatgcctccacaacatgggtatcctatgcagggaattccccagcaaggcatccct
cctcagggtatacctccccctcaaatgcaagcacatttcgctgctcagcctcagtattga

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