KEGG   Torulaspora delbrueckii: TDEL_0C02700
Entry
TDEL_0C02700      CDS       T02236                                 
Symbol
TDEL0C02700
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
tdl  Torulaspora delbrueckii
Pathway
tdl03018  RNA degradation
tdl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TDEL_0C02700 (TDEL0C02700)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TDEL_0C02700 (TDEL0C02700)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdl03019]
    TDEL_0C02700 (TDEL0C02700)
   03041 Spliceosome [BR:tdl03041]
    TDEL_0C02700 (TDEL0C02700)
Messenger RNA biogenesis [BR:tdl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TDEL_0C02700 (TDEL0C02700)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     TDEL_0C02700 (TDEL0C02700)
Spliceosome [BR:tdl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    TDEL_0C02700 (TDEL0C02700)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 11500494
NCBI-ProteinID: XP_003680370
UniProt: G8ZRL7
LinkDB
Position
3:474199..474726
AA seq 175 aa
MLPLYLLTNAKGQQVSVELKNGEIVEGELTNVDNWMNLTLSNVSQQDTIGNSGNIAFQKE
IVKSQEVYLRGTYIKYIKLQDNVIDQVKQQISNNNGSKDNNSGNFRRGNKFGGRDNFRRG
NQNNRGYNNNQSGGGRRPYQNRYENSQRPSSGSGMGGFVQQHRSQRDTNNANVEF
NT seq 528 nt   +upstreamnt  +downstreamnt
atgctaccgctatacctgctgacaaatgccaaaggacaacaggtgagtgttgagcttaaa
aatggcgagatcgtcgagggtgaacttaccaacgtcgataactggatgaacctaaccctc
agtaacgtaagtcaacaggataccattgggaacagtggcaatatcgcctttcaaaaagaa
attgtcaaatcacaggaagtctatctaagaggtacctatatcaaatacattaaattacag
gataatgtcatcgatcaagttaagcaacaaataagtaacaacaatggatccaaggacaat
aatagtggtaatttcagaagaggtaacaaattcggtggtcgtgacaactttagacgtggg
aaccaaaataacagaggttataataataaccagagtggtggtggtcgtcgcccataccaa
aatcgttacgaaaattcacaaagaccttcaagtggcagtggtatgggtgggtttgtgcag
caacacagatcccaaagagatacgaataatgcgaacgtcgaattttaa

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