Torulaspora delbrueckii: TDEL_0C05910
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Entry
TDEL_0C05910 CDS
T02236
Symbol
TDEL0C05910
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03440
Homologous recombination
tdl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TDEL_0C05910 (TDEL0C05910)
03450 Non-homologous end-joining
TDEL_0C05910 (TDEL0C05910)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdl03032
]
TDEL_0C05910 (TDEL0C05910)
03400 DNA repair and recombination proteins [BR:
tdl03400
]
TDEL_0C05910 (TDEL0C05910)
DNA replication proteins [BR:
tdl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
TDEL_0C05910 (TDEL0C05910)
DNA repair and recombination proteins [BR:
tdl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
TDEL_0C05910 (TDEL0C05910)
BRCA1-C complex
TDEL_0C05910 (TDEL0C05910)
NHEJ (non-homologous end-joining)
MRX complex
TDEL_0C05910 (TDEL0C05910)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
ERM_helical
AAA_29
AAA_13
AAA_22
ABC_tran
AAA_16
Ribosomal_L28e
Motif
Other DBs
NCBI-GeneID:
11500815
NCBI-ProteinID:
XP_003680691
UniProt:
G8ZSI8
LinkDB
All DBs
Position
3:complement(1063668..1067585)
Genome browser
AA seq
1305 aa
AA seq
DB search
MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGSNGSGKTTIIECLKYATSGDLPPNSK
GGAFVHDPKITGDKDIRAQVKLAFTSANNLNMIVTRNIQLLVKKTTTTFKTLEGQLVIVN
GNGNRNTLSTRSVELDTQVPLYMGVPKAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQ
AMKFTKALDSLKGIKKDMSVDIKLLKQSVEHLRVDRDRSKATQVNISQLESKIASYQQEV
KNIEEQLTDITEQSDRLFKSNQDFQKVLSMSENLKNNRESIKDQIKRLSSAIDLIDLPKP
ALEQLLFNFSSSLHEKEEEVMRLEAVVKSMKSHAIELQNDCNVLIRRQGELTANKVTHER
NLETLKHMEQDLTNAYGASFGDKTTGDNITGQLKSIRDKLEQERNEFVSGGDKELKDLNK
ELSDAKHAAIVQSERLEYNKKDTIKLASEINRLGTELTVLEFTNEDLNNEKESLNKFTEK
LKDLEKQDNISNINLQIKEKNNKMIILENDLETLQGRISKTSEQADLFAKLSFIKKAIQE
KRQELQRRIEGFQIDSVAKKLNLNYGPDIDIEFKKSYLDLQKNFTNKRQKFQVADKKYTE
VSLKLTQVENELKDNEILASNLAKKLSNSLPEDCPIEEYDDAVVESDLSYRTALENLKMH
QTTVEFNKKALEVAEREDSCYLCSRKFETEQFRSSLLAKLRVKVDSRFEQTLKSTLKDEK
EYLDTLRSLKEDILALKTAKNKIVELKSSMVGIVKKVEELKKEKDEYEIDNNKMEEDKKY
VEGELRSTVEYFTRTKREVKHLEEQSKTISDELALYGTVEDGVKTVDELQIAQREKNEQL
RTLRKEINHLQGQKETKSAEFTRLLSLIKERNSKVGEIERALSVRENIESDIAAKNAQVE
TLRASLQTLERGMEGQSEKVREIEGRLNNKKQIFDTEFNKLNDSLTVMDKRLNEFARIQS
EIDSFKSEGLQALDVCARQLTEFQEKMNDLNENIESKNKELAEGTRKLRDSTNEKRNLKQ
NIEMLGLRSSLGEIEREISNLDVRNAEAERDKYQQESLRLRNRFEKLSSENAGKLGEIKQ
LQNQIQAFTLQLRTDYKDVDSDYHKKWVELQTRTFVTDDIDTYSKALDSAIMKYHGLKMQ
DINRIIDELWKRTYSGTDVDSIQIRSDEVSSNVKGKSYNYRVVMYKQDAELDMRGRCSAG
QKVLASIIIRLALSETFGVNCGVIALDEPTTNLDEENIESLAKSLSNIIEMRRHQKNFQL
IVITHDEKFLNHMDASQFTDHFFRVKRDDRQKSQIEWVDINKVTN
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctatctacaaactttccatccagggtattcgttcttttgactctaatgatcga
gaaacgatagagtttggtaagcctttgacacttatcgttggtagtaatgggtcggggaag
acgactatcatagaatgtctcaagtatgctacttcaggggatttaccacctaatagtaaa
ggtggagcgtttgttcatgatcccaagatcacaggtgataaggatatcagagcacaggtg
aaactcgcgttcactagtgcaaataatttgaatatgattgttactagaaacattcaactg
cttgtaaagaagactacgactacgttcaagactctagagggtcaattggtgattgtgaat
ggcaatggaaatcgtaacacgttgagtacgcggtctgtagagttggacacacaggtacca
ctttatatgggggtccccaaggctatcttagagtatgtcatcttttgtcatcaggaagat
agtttatggcctttgagtgagccatcgaatctaaaaaagaagtttgatgaaattttccaa
gcaatgaagtttacaaaagctttggacagtctgaaaggaatcaaaaaggatatgtcagta
gatataaagctcctgaaacagtctgttgaacatctgagggtcgaccgagatcgatccaag
gctacccaggtcaatatctcacagctcgagtcgaaaattgcgtcctatcaacaagaggta
aagaatatagaagaacaattgaccgatatcacggagcaatcagacagattgttcaagtca
aaccaggattttcagaaagttttgtcaatgtcggaaaacttgaagaacaatcgtgaatct
ataaaggaccaaataaaaagattaagcagtgccatcgacctgattgacttaccaaaacca
gcgcttgagcaactgctgttcaatttctcaagttcactgcatgagaaggaggaagaagtg
atgagattagaagccgtggtgaagtccatgaaatcgcatgcgatcgagttacaaaacgat
tgtaatgtgcttattcgaagacaaggtgaattaacagcaaataaggtcacgcatgagaga
aatttggagacactaaagcatatggaacaagatctaaccaatgcctatggtgcatcgttt
ggcgataagacgactggtgacaacattacgggtcaacttaagtccatcagagacaaactt
gagcaggaaaggaatgaattcgttagtggtggggataaagagctgaaagatctcaacaaa
gagctatcggatgccaaacacgctgcaattgttcagagcgaaaggctggaatataataag
aaggacacaataaagttggctagtgaaataaatcgccttggaactgaattgactgtgttg
gaatttacgaacgaagacttgaataacgaaaaggaatccctcaacaagttcactgaaaaa
ctgaaagatctggagaaacaggataacataagcaacattaatcttcaaataaaagagaaa
aacaataagatgatcattttggaaaatgatttggaaaccttacagggacggatatcaaaa
actagcgagcaggcagaccttttcgcgaaactatcattcataaagaaggcaatacaggaa
aaaaggcaggaattacaaagaaggatcgaaggttttcagatagattctgtggctaaaaag
ttgaacttaaactacggtcctgacattgatattgaattcaaaaaatcatatctcgatttg
caaaagaacttcacaaacaagagacaaaaatttcaggttgcggacaaaaagtatacggaa
gtgtctcttaagcttactcaagtggaaaatgaattaaaggataacgaaatcttggcatct
aacctagctaaaaaactatcaaattcgctacctgaggattgccctattgaagaatatgat
gacgctgttgtcgagtcagatttgtcgtacagaacagcactagagaatttaaagatgcac
caaacaacagttgagttcaacaaaaaagcgttagaagttgcagaaagggaagactcatgc
tacttatgctctagaaagttcgaaactgaacaattcaggagttcattacttgcaaagctt
agagtcaaagtggattctaggtttgagcaaactcttaaaagtactttgaaggatgaaaag
gaatatctggatacattaagaagtttgaaggaagatattcttgcgcttaagacagcgaaa
aacaagatagtagaactcaagagtagtatggttggtattgttaaaaaggttgaagagttg
aagaaagagaaagacgagtatgaaatagataacaataaaatggaagaagacaaaaagtac
gtcgagggcgagctgagatctactgtagagtatttcaccagaactaaacgagaggtaaag
caccttgaagaacagtctaaaactatttcggacgaattagcattatatgggacggtggaa
gatggcgttaaaactgtcgatgagctgcaaattgctcaaagagaaaagaatgaacaactg
cgtacactgagaaaggaaataaatcatttgcaaggccagaaggaaacaaagtcagctgag
tttacgaggctcctcagcctcatcaaagaaaggaactcaaaggttggggagatcgaaaga
gcattgtctgtgagagaaaatatcgaaagtgacattgcggcaaagaacgcacaagtagaa
accctcagggctagtcttcagactttggaaagaggaatggaggggcaaagtgaaaaagtt
cgggagattgaaggaaggctcaataacaaaaaacagatttttgatactgaatttaataaa
ctcaatgactctttgacagtaatggataagcggcttaatgagtttgcaagaatacaaagt
gagattgacagcttcaagtctgaaggtctccaggctctcgacgtttgtgcaagacagctg
actgaatttcaggaaaagatgaatgatctgaatgagaatattgagagtaaaaataaagaa
ctggcggaaggaaccagaaaactccgagattcaaccaatgaaaagagaaatttgaagcaa
aacattgagatgctgggcttgagatcttccttgggtgaaatcgagcgcgaaatatctaat
ctggatgttcgaaatgctgaggctgaacgtgataaataccaacaagagtcgcttcgccta
cggaaccgcttcgaaaagttaagttctgagaatgctggtaagctaggtgaaatcaagcaa
ctgcaaaaccaaattcaagcatttactcttcaactgaggacggactataaagatgtcgac
agtgactatcataagaaatgggttgaattgcaaacaagaacttttgtcacagatgatatt
gacacgtattcaaaagctttagatagtgctatcatgaaatatcatggtctgaagatgcaa
gacatcaacagaatcatcgatgagctctggaagcgtacgtacagtggcaccgatgttgac
tcgattcagataagatctgatgaggttagtagcaatgtgaagggtaaatcatacaactac
agggtggtcatgtataagcaagatgccgagctggatatgagaggcaggtgctctgctggt
cagaaagttctggcatctatcattataagattggctttatcagagacgttcggtgttaac
tgtggtgtgattgctctggatgaacctaccacgaaccttgatgaagagaacatagagagc
ctggctaaatccctgagcaatatcattgagatgagaaggcatcagaagaatttccaattg
attgttatcactcatgatgaaaagtttctcaatcatatggacgcttcacagttcactgat
catttctttagggttaagagagatgatagacaaaaatctcaaatcgagtgggttgatatt
aataaagtcactaattga
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