Torulaspora delbrueckii: TDEL_0D01080
Help
Entry
TDEL_0D01080 CDS
T02236
Symbol
TDEL0D01080
Name
(RefSeq) hypothetical protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
tdl
Torulaspora delbrueckii
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdl03021
]
TDEL_0D01080 (TDEL0D01080)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TDEL_0D01080 (TDEL0D01080)
5.6.2.5 RNA 5'-3' helicase
TDEL_0D01080 (TDEL0D01080)
Transcription machinery [BR:
tdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TDEL_0D01080 (TDEL0D01080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
UvrD-helicase
AAA_19
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-GeneID:
11502127
NCBI-ProteinID:
XP_003680903
UniProt:
G8ZSU8
LinkDB
All DBs
Position
4:complement(197455..203661)
Genome browser
AA seq
2068 aa
AA seq
DB search
MGPDAQVEERQAAARKYLPIIEKVYAGVNNDISESSLLGELLKLIAQLPKDFHLFCDPDF
RPLSIFCLTIFSFNEQETMTWLKNRFNPTLASCDKCILNFTRGKCKMLQHFAIQRHVPHE
HVAKFNDIVCLWRIEAILPVLHQISNKDNTAVEVTRDIELAVFECLCNPHMLRLNKEFKM
TFDVIFKFLYLSKQPFLDSENSELMRTFIAGMIYCWCEGTPEQIQWARTILKKLHTEKFS
LTASNMTSDILEEVNIHVLFLQNPANWNEVVVSQFWSRLISVFSFFDEDALIDNFEVPNN
IESLRKTYRFPIESIFKLWYHHLGKTYRDKPLEFLLRALSMFLDKLGSEFWSKIEPYTFH
SILDIVFDRDSFAQKLIRIQDNKIAEDDIELVLSFSGCLTDMVSWTLMFYHSLTESKKIQ
MVKKVSMAFLRVIANQPSLKSIPKACLMNSSTALLTAVLTIKNEERDKLYERDDFEVVLY
SKTDSRALLNNPLIQDVVIRSATHPDELYPGLGNSTTSVSTSAMMVLTKCMNFDILMLCQ
TSYKLYAGKHINNIPFTDALLDNLTKKLDLRSFHDGPLLAKQLLVSLRDINGLLIISSKE
PAAVRHNADVKRFLVLCTGLVAKFADILPKQLSNVLTDSEAAQGFWSCIFSPNTELYQAA
TNILYDTFDVEGRLEGIQVILAGNFTGHLSAINRVLHQLIQCEFYEPCPRAIRVLMDVVS
AFTDPVGGVFSNFSTLRNNKTDSELCHFWELTWSFLDTIYRCTLTWATKYEYSELENFTK
DTLDLSRTLVDSYREFLDIFQDTKVDFFESVLKAMKNMLYWLRLSDEALLDSCVKLIVSA
SDLAMEKDIKFSDDLVEQMAKYGSKAKKYSNKLSEQQMSEILTKAKSFDRELTEKIIAEA
EDYHKEKALMKLGSPAPSSMSPSPAVESKADFLQRKALASSITGRPKTSQSKITSFGTMQ
AGSMPRISTKPTKPLSKMELARRQLLSNRVVHPPSNTVFHSKTRTAADRNGESSSDESDG
DIEVARELFATAKAKGEGIQTLDINGKAVRKSTNAERAKIEEENMRKRLNVDLNPLYETV
LQWDYSRRSDYPDDESPDKYSKVKDSFNSVNEYRKVIRPLLLLECWQGLCSTRDREDFKP
FSVIVGNRTAVSDFYEVYASASKTMIQDAGITESDIIVLAYFPGNEQVSTMRNEDFKKAS
HTCLAKVKTLKNTKGNKVDVTLRIHRKHNFSKFLTLRSEIFAVKVMQMTTVEREYSTLEA
LEYYDLVEQILRAAPSQSVEVDSSEVDFVKSNYKLNSSQAKAIVNTVSKEGFSLIQGPPG
TGKTKTILGVIGYFLSTRNTLPSNVIQAPKGSVSLSTEQLLKKQKILICAPSNAAVDEIV
LRLKDGITNRQGGKFQPSIVRVGRSDAVNAAIRDLTLEEQVDKQVSQKNYEFSNNPDLEK
KFSSTVAQRRELRAKLDAENGSASSSLSTEDIAKLQIKIRELSKELNELGRQRDEIREKN
SVNYRNRDLDRRNAQARILASSNVICSTLSGAAHDVLASLGVKFDTVIVDEACQCTELSA
IIPLRYGGKRCIMVGDPNQLPPTVLSGAASNFGYNQSLFVRMEKNSSPYLLDVQYRMHPA
ISKFPSAEFYNGRLKDGPDVEILNIRPWHKNAPLTPYRFFDIVTGKESQNAKSMSYVNTE
EIRVAIELVENLVNKYERELDFSGKIGVISPYKEQAMTMRRQFRSHFGASIAQYVDFNTI
DGFQGQEKEIIIISCVRADDSKTSVGFLRDFRRMNVALTRAKTSMWILGHQKSLVKNKLW
RNLITDAQGRGCLEFACPGFLNKKNHNAQRTLERFRGSHDGPKMDDEYNPYERDQYKKIQ
KTKRKHEETNASGKALGRGNTPSAAGAVGVKKKKSSIFGGPSVVEAGKHANGPYIKEKGS
SKQVETSTKATDNRHVLFSDNVQVIPQTGDENMDANRNAIADHQGAAKSRSSDDENDYVP
RPVEMKTDLRHQESESVADEDDYHPADAPNGLRDCAVPTSVSPISQNVSPAGSPSTVSNE
TGHNGQKATGRRQKSSTPFIPRRRQQHR
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgggaccagatgctcaggtcgaagaacgacaagctgccgccagaaagtacctgccgatc
atagagaaggtctacgctggggtcaacaatgatatttccgagtctagccttttaggtgag
ctgttgaaactgatagctcaactacccaaggatttccatctattttgtgatccagacttc
aggccactttcaattttttgtctgacaatattctcattcaatgagcaggagactatgacc
tggttaaaaaacaggtttaatccaactttggctagttgtgataaatgcatattaaatttt
actcgtggtaagtgtaagatgctccagcattttgccattcagagacatgtacctcacgaa
catgtcgccaagttcaacgacatagtctgcctgtggagaattgaagccatccttcctgtc
ttgcatcaaatttccaacaaggataacactgcagttgaagtcaccagagacattgaattg
gccgtcttcgaatgcttgtgcaatccacacatgttacgactgaataaagaattcaaaatg
acatttgacgttatattcaaatttctatacctgtcgaaacagcctttccttgattctgaa
aattcagaattaatgcgcacattcatcgcagggatgatttattgttggtgtgaaggcact
cccgagcagatacaatgggctcgaaccattctcaaaaaattgcatactgagaaattctct
ctcacagcttcaaacatgacttcagatatactggaagaagttaacatacatgtacttttt
ctgcaaaacccagcgaattggaatgaagttgttgtttcacagttttggtctaggctaata
tcagttttctcatttttcgatgaagatgctcttatagacaatttcgaagttccaaataac
attgaatcgctgagaaagacgtataggtttcctattgaatccatctttaagctgtggtac
catcacttggggaaaacataccgtgataaacctttggaattcttactgagagctctaagc
atgttccttgataaactgggttctgaattttggtctaaaattgaaccgtacacattccat
agtattttagacatcgttttcgatcgtgattcttttgcgcaaaaactcatccgtattcag
gataacaagatagctgaagatgacattgaacttgtcctttcattctctggttgcctcact
gatatggtttcatggacattgatgttttatcactcattgacagaatctaaaaagatccag
atggtaaaaaaagtttcgatggcatttctaagagtcatcgcaaatcagccttcgttgaag
tcaattcctaaagcttgcttgatgaactcgtctacagctctattaacagcagtattgacc
attaagaatgaggaacgtgataaactgtacgagagagatgatttcgaagttgtactttat
tcaaagacggactcgagagcactgttaaataacccactaattcaagacgtggtaatacgt
tcggctactcatccggatgagctgtatcctggcttaggtaactcgacaacttccgtttca
acatccgccatgatggtgctgaccaagtgcatgaatttcgacatcttgatgctttgtcaa
acatcatacaaactatatgcagggaagcatatcaacaacattccttttacggacgctttg
ctggataacttaacaaaaaaattggaccttaggtcatttcatgatggcccacttctagca
aagcagctactagtatcattaagggatattaacggattgttgataatttcttccaaagaa
ccagctgcagtcaggcataacgctgatgttaagcgtttcttggttctatgcaccggcttg
gtggccaaatttgctgatattctgcccaaacaactttcaaatgtgcttacggatagtgaa
gctgcacagggcttctggtcatgtatcttttcacctaacacggagctataccaagcagca
acaaatatactttacgacacttttgatgttgaaggcagactggaaggtattcaagtcatt
ttagctggtaacttcactggtcacctaagtgccatcaatcgtgttttgcatcaactaata
caatgtgagttttatgagccatgtcctagggccatccgagtcctcatggacgtcgttagt
gcattcacggacccagttggcggggtgttctctaatttctctaccctcagaaacaataag
accgatagcgaactttgtcacttctgggaattgacttggtcttttttggataccatctat
cgttgtacgctaacgtgggcgacgaagtacgagtattctgagcttgagaattttaccaaa
gacacgctggatttgagcaggacgctggtagactcttatagggagttccttgatatattc
caagataccaaggtggacttttttgaaagtgttttgaaagctatgaagaacatgctttat
tggttgagattgagcgacgaagctttattggactcttgtgttaaactaattgtgagcgcc
tccgatttagccatggagaaggacataaagttcagcgacgacttagttgaacaaatggca
aagtatggatcgaaagccaaaaaatactccaataagctttccgagcagcagatgtcagaa
atcttgactaaagcgaagtcttttgatcgcgaattgacagaaaagattatagcagaggca
gaagattaccacaaggaaaaagctctcatgaaattgggaagcccggcaccgtcgagcatg
tctccatcaccggcggtagagtcgaaggccgacttcttgcaacggaaggctttagcctct
tctatcacagggcgccctaagacctctcagtccaagatcacgtcatttggtaccatgcag
gcaggcagcatgcccagaatatctaccaaaccaactaaaccactatccaaaatggaactt
gccagacgacagcttctaagtaatcgagtggtgcatcctccgagtaacactgtgttccat
tctaagacaaggactgctgcagacaggaatggcgaaagcagcagtgatgagagcgatggc
gatattgaggttgccagggaactgtttgccactgcaaaagcgaagggagaaggtatacag
actcttgatatcaacgggaaagctgttcgtaagagcacgaatgcagaacgtgcaaaaatt
gaagaggaaaatatgcgtaaaaggctcaacgttgatctcaacccattgtacgagacagtt
ttgcagtgggactattccagacgaagtgactatcctgatgacgaatctcccgataagtat
agtaaggtaaaggactcattcaactccgtgaatgaatataggaaagttatcaggccatta
ctacttctagagtgttggcaagggctgtgctctacccgtgatagagaggattttaaaccg
ttcagtgtaattgtgggcaatagaacagctgtttccgacttttacgaggtttacgcttcg
gcctcgaagaccatgatacaggacgcaggtatcacagaatcagacataattgttctggct
tattttcctggtaacgaacaggtctcgacaatgaggaacgaagatttcaagaaggcatct
catacctgtctcgcgaaggttaaaacattgaaaaatacaaaaggcaataaagtcgatgtc
acactgcgaattcatagaaagcacaacttctccaagtttttgactttgaggtcagaaata
tttgctgttaaagtaatgcaaatgaccactgtggagagagaatactcaactctagaagca
ctggaatattacgacctggtagaacaaattttacgcgccgccccatcacaatcagtcgaa
gttgatagcagcgaagtcgattttgtgaaatccaactacaaactgaattcttctcaagcg
aaagcaattgtcaacactgtttcaaaagagggcttctccttgattcagggtccacccggt
actggtaaaacgaaaacaatattaggtgtcattggctactttttgtcaacgcgtaataca
ctgccatccaacgtcattcaagcgccaaagggcagtgtatcgttatccactgagcaactc
ctgaagaaacagaagatcttaatttgtgcaccaagtaatgccgcagtagatgagatcgtc
ctccgtctgaaggatgggataaccaataggcaaggtgggaagtttcagcctagcattgta
cgtgttggtcgttctgacgccgtgaatgcagcgatcagagatttgactctggaagagcag
gtggacaaacaggtatcacagaaaaattacgagttctctaataatcctgacttggaaaag
aagtttagctccactgttgcccagagaagagagctaagagccaaattggatgccgagaat
gggtctgcttcaagttctttgtcaactgaagatatcgctaagttgcagataaaaatccga
gaactcagcaaggagcttaatgaactcggacggcaaagagacgaaatccgagagaagaac
tctgtcaattataggaacagagatcttgatagacgcaatgctcaagctcgtatcttggca
agtagcaatgtcatatgttctacgctttcaggtgccgcacacgatgtgctagcttcgctt
ggtgtgaaattcgatactgtcatagttgatgaggcttgtcagtgtaccgagttatcggca
attattccccttcgatacgggggtaagcgctgtatcatggtgggtgatccaaatcagctg
ccacctactgttctctctggcgcggcaagcaattttggttataatcagtctctttttgtg
cgcatggagaagaatagctcgccatacctgttggacgtgcagtatcgtatgcacccggcg
atcagtaagtttccatccgcagaattttataatggtcgtttgaaagatgggccagacgtt
gaaatactgaacattcgaccttggcacaaaaatgcacctctcacgccatatcgatttttc
gatatagttactggtaaggaatcccaaaatgcgaaaagtatgtcatatgttaacacggaa
gaaatacgagtagcgattgaattggtcgaaaacttggtgaataaatatgaaagggaactc
gacttctctggtaaaattggggtaatttccccctataaggagcaagcaatgaccatgaga
agacaattcagatctcactttggcgcttccatcgcgcagtatgttgatttcaacacaatt
gatggttttcaaggtcaagagaaggaaattatcattatctcatgtgttcgtgctgacgat
tccaagacaagtgttggtttcttaagagacttccgccgtatgaacgttgcattgaccaga
gcgaagactagtatgtggattcttggtcaccaaaaatctctggtcaaaaataagctctgg
cgaaatttaattaccgatgcccagggaagaggctgtttggaatttgcctgtcctgggttt
ctcaataagaaaaatcacaatgctcaaagaaccttggaaagattccgaggctcgcacgat
ggtcctaagatggacgacgaatacaatccgtatgaaagagatcaatacaagaagattcag
aaaactaaacgtaaacatgaagaaacgaatgccagcgggaaggctctgggcagagggaat
acaccttcagcagctggagcagttggagtcaagaagaagaaatcatccatatttggaggt
ccctctgtagtcgaagcaggaaaacatgcgaatggtccatatatcaaagaaaagggaagc
tctaaacaagtagaaaccagtaccaaggcaacggataatcgacacgttctattttctgat
aatgtccaagtaataccacagaccggtgacgagaacatggacgctaataggaatgcaatc
gcagatcatcaaggagcggcgaaatcgagatccagtgacgacgagaatgattatgttcca
cgtccagtggaaatgaaaaccgatttgcgccatcaagaatcagagtctgtcgcggatgag
gatgactatcaccccgctgacgcaccgaacgggctccgcgattgtgcagtaccaacttcg
gttagtcctatcagccaaaatgtctctcctgctggaagcccatcgacagttagcaatgaa
actggtcataatggccaaaaagccactggaaggagacaaaaatcgtcaacgccattcatc
cccaggagaaggcagcagcatcgataa
DBGET
integrated database retrieval system