Torulaspora delbrueckii: TDEL_0D02490
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Entry
TDEL_0D02490 CDS
T02236
Symbol
TDEL0D02490
Name
(RefSeq) hypothetical protein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
tdl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TDEL_0D02490 (TDEL0D02490)
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0D02490 (TDEL0D02490)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0D02490 (TDEL0D02490)
03041 Spliceosome [BR:
tdl03041
]
TDEL_0D02490 (TDEL0D02490)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TDEL_0D02490 (TDEL0D02490)
mRNA degradation factors
5'-3' decay
Lsm complex
TDEL_0D02490 (TDEL0D02490)
Spliceosome [BR:
tdl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
TDEL_0D02490 (TDEL0D02490)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
LysM_RLK
DUF4325
Motif
Other DBs
NCBI-GeneID:
11502268
NCBI-ProteinID:
XP_003681044
UniProt:
G8ZT89
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All DBs
Position
4:485240..485488
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AA seq
82 aa
AA seq
DB search
MSAKGTSSVSSQFLSEIIGKPVNVKLHSGMLYSGRLESIDGFMNVALSKVTEHYENGHNG
LLRNYNTDVFLRGTQVMYISEV
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagggaacctcgagtgtgtcgtcacaattcctgtccgagatcatcggcaaa
ccagtaaacgtgaaactgcactctggaatgctgtatagcggccgtttggagtcgattgat
gggtttatgaacgtagcactgtcaaaagttactgaacattatgagaatgggcacaatggg
ctgctcagaaattacaacacagatgtttttctgagagggactcaggtcatgtatattagt
gaagtataa
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