Torulaspora delbrueckii: TDEL_0D04830
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Entry
TDEL_0D04830 CDS
T02236
Symbol
TDEL0D04830
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03013
Nucleocytoplasmic transport
tdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TDEL_0D04830 (TDEL0D04830)
03015 mRNA surveillance pathway
TDEL_0D04830 (TDEL0D04830)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0D04830 (TDEL0D04830)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TDEL_0D04830 (TDEL0D04830)
mRNA cycle factors
P-body specific factors
TDEL_0D04830 (TDEL0D04830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
11502501
NCBI-ProteinID:
XP_003681278
UniProt:
G8ZTX3
LinkDB
All DBs
Position
4:880842..881939
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AA seq
365 aa
AA seq
DB search
MDDKRSKSLRPASQSSCSNHSKAAEAFPLETKGQSKSSRKQNVERNKTGKGRRRDRGKKN
DDVGVKLVLRLLPPDLSQDQFLETIKPEVGEFSDCGVLEWYYVRGHYPQKLSTRPVYSRC
YLIFESTESLAEFTKKVQPIKFVDDKDNATNVVTRVSTYVKRFVPNTVDPSPVSAALEGT
ITEDPLFLTFMKSLKILEEKKSDYSFADVSILKPLEKEVAKQKAVESEIQRKTENALIAL
TGDSGKKKKKEKKKGKKKELKPKEEAGGESTSGRKRKGTKKKNKALKGGEHAAKDTVKNN
NIVILEAAGRKELQRRKKMQLEKEKALESPSKAKIKPKQRAKGKSEDSEDGTKLKMLKRK
VPEQS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagcgttcaaagagtttaaggccggcatctcaaagttcctgttcaaatcat
tccaaagctgcagaagcctttccgctggaaactaaaggtcaatcaaagtcatctcgtaaa
caaaacgttgaacgaaataagacaggtaagggtagaagacgagatcgtggtaagaaaaat
gatgatgttggagtcaagcttgtcctgcggttattacctccagatttgagtcaagatcag
tttttagagaccataaaacctgaagttggtgaattttctgattgtggagtgttagaatgg
tactacgtacgtggacattacccccagaagctgagcacaaggcctgtctactctcgttgc
tacctcatattcgagagcactgaatctctggcagaattcaccaaaaaagttcagcctatt
aagtttgttgatgataaggataatgccactaacgtagtgaccagggtgtcaacctacgtc
aagagatttgtaccaaacacggtggaccccagtcctgtcagcgccgcacttgaaggcacc
atcacagaggatccgctctttttaactttcatgaaatcattaaagattctagaagaaaag
aaatcagactattcgtttgctgacgttagtattttgaaaccactcgagaaagaagttgcc
aagcagaaagcggttgagtcagagatacagagaaagactgaaaatgcattgatagcacta
actggggattcaggaaagaagaagaagaaggagaagaaaaagggcaagaagaaggaattg
aaacccaaagaagaagctggtggtgagagtacatcaggccgtaagcgcaagggaacgaag
aagaaaaataaggcgctcaaaggtggagagcatgctgctaaagatacagtgaagaacaac
aatatagtaatcctcgaagctgctggtaggaaagaattacaaaggagaaagaaaatgcaa
ttggagaaagaaaaggctttagagagcccttcaaaggcaaagatcaagcccaagcagcga
gccaaagggaaatctgaagattcagaagatggcacaaaattgaaaatgcttaaaagaaaa
gttccagagcagtcttaa
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