KEGG   Torulaspora delbrueckii: TDEL_0D04830
Entry
TDEL_0D04830      CDS       T02236                                 
Symbol
TDEL0D04830
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
tdl  Torulaspora delbrueckii
Pathway
tdl03013  Nucleocytoplasmic transport
tdl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tdl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TDEL_0D04830 (TDEL0D04830)
   03015 mRNA surveillance pathway
    TDEL_0D04830 (TDEL0D04830)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdl03019]
    TDEL_0D04830 (TDEL0D04830)
Messenger RNA biogenesis [BR:tdl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     TDEL_0D04830 (TDEL0D04830)
   mRNA cycle factors
    P-body specific factors
     TDEL_0D04830 (TDEL0D04830)
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 11502501
NCBI-ProteinID: XP_003681278
UniProt: G8ZTX3
LinkDB
Position
4:880842..881939
AA seq 365 aa
MDDKRSKSLRPASQSSCSNHSKAAEAFPLETKGQSKSSRKQNVERNKTGKGRRRDRGKKN
DDVGVKLVLRLLPPDLSQDQFLETIKPEVGEFSDCGVLEWYYVRGHYPQKLSTRPVYSRC
YLIFESTESLAEFTKKVQPIKFVDDKDNATNVVTRVSTYVKRFVPNTVDPSPVSAALEGT
ITEDPLFLTFMKSLKILEEKKSDYSFADVSILKPLEKEVAKQKAVESEIQRKTENALIAL
TGDSGKKKKKEKKKGKKKELKPKEEAGGESTSGRKRKGTKKKNKALKGGEHAAKDTVKNN
NIVILEAAGRKELQRRKKMQLEKEKALESPSKAKIKPKQRAKGKSEDSEDGTKLKMLKRK
VPEQS
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggatgacaagcgttcaaagagtttaaggccggcatctcaaagttcctgttcaaatcat
tccaaagctgcagaagcctttccgctggaaactaaaggtcaatcaaagtcatctcgtaaa
caaaacgttgaacgaaataagacaggtaagggtagaagacgagatcgtggtaagaaaaat
gatgatgttggagtcaagcttgtcctgcggttattacctccagatttgagtcaagatcag
tttttagagaccataaaacctgaagttggtgaattttctgattgtggagtgttagaatgg
tactacgtacgtggacattacccccagaagctgagcacaaggcctgtctactctcgttgc
tacctcatattcgagagcactgaatctctggcagaattcaccaaaaaagttcagcctatt
aagtttgttgatgataaggataatgccactaacgtagtgaccagggtgtcaacctacgtc
aagagatttgtaccaaacacggtggaccccagtcctgtcagcgccgcacttgaaggcacc
atcacagaggatccgctctttttaactttcatgaaatcattaaagattctagaagaaaag
aaatcagactattcgtttgctgacgttagtattttgaaaccactcgagaaagaagttgcc
aagcagaaagcggttgagtcagagatacagagaaagactgaaaatgcattgatagcacta
actggggattcaggaaagaagaagaagaaggagaagaaaaagggcaagaagaaggaattg
aaacccaaagaagaagctggtggtgagagtacatcaggccgtaagcgcaagggaacgaag
aagaaaaataaggcgctcaaaggtggagagcatgctgctaaagatacagtgaagaacaac
aatatagtaatcctcgaagctgctggtaggaaagaattacaaaggagaaagaaaatgcaa
ttggagaaagaaaaggctttagagagcccttcaaaggcaaagatcaagcccaagcagcga
gccaaagggaaatctgaagattcagaagatggcacaaaattgaaaatgcttaaaagaaaa
gttccagagcagtcttaa

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