KEGG   Torulaspora delbrueckii: TDEL_0D05210
Entry
TDEL_0D05210      CDS       T02236                                 
Symbol
TDEL0D05210
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
tdl  Torulaspora delbrueckii
Pathway
tdl03030  DNA replication
tdl03410  Base excision repair
tdl03420  Nucleotide excision repair
tdl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TDEL_0D05210 (TDEL0D05210)
   03410 Base excision repair
    TDEL_0D05210 (TDEL0D05210)
   03420 Nucleotide excision repair
    TDEL_0D05210 (TDEL0D05210)
   03430 Mismatch repair
    TDEL_0D05210 (TDEL0D05210)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tdl03032]
    TDEL_0D05210 (TDEL0D05210)
   03036 Chromosome and associated proteins [BR:tdl03036]
    TDEL_0D05210 (TDEL0D05210)
   03400 DNA repair and recombination proteins [BR:tdl03400]
    TDEL_0D05210 (TDEL0D05210)
DNA replication proteins [BR:tdl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TDEL_0D05210 (TDEL0D05210)
  DNA Replication Termination Factors
   ELG1-RFC complex
    TDEL_0D05210 (TDEL0D05210)
Chromosome and associated proteins [BR:tdl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TDEL_0D05210 (TDEL0D05210)
DNA repair and recombination proteins [BR:tdl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TDEL_0D05210 (TDEL0D05210)
  Check point factors
   HRAD17(Rad24)-RFC complex
    TDEL_0D05210 (TDEL0D05210)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_14 AAA_16 AAA_22 Rad17 AAA_3 RuvB_N nSTAND3 Viral_helicase1 Mg_chelatase TniB AAA_assoc_2 DNAX_ATPase_lid MeaB DUF562 AAA_19 KTI12 NTPase_1 ATPase_2 FtsK_SpoIIIE SRP54 RNA_helicase NPHP3_N Gp44_lid
Other DBs
NCBI-GeneID: 11503472
NCBI-ProteinID: XP_003681316
UniProt: G8ZU11
LinkDB
Position
4:945843..946811
AA seq 322 aa
MMSRPQLTLQLPWVEKYRPEKLKDIVGNEETVERLEQIAKDGNMPHMIISGLPGIGKTTS
VHCLAHELLGKSYSQAVLELNASDDRGIDVVRNQIKHFAQKKCHLPPGKHKIIILDEADS
MTAGAQQALRRTMELYSNTTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEQVLKRLMEI
IKAENVSFTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVSGDNVFKIVDSPHPLIVKK
MLLADTLEESISHLKNDLWDKGYSAVDIVTTSFRVTKSLYQVKEAQRLEMIKEIGITHMR
ILEGVGTYLQLASLLARIHRLR
NT seq 969 nt   +upstreamnt  +downstreamnt
atgatgtctagacctcaattgaccttgcaacttccgtgggtagagaaatatcgtcctgag
aagttgaaggatatagttggtaatgaggaaaccgtcgaaagattggagcaaattgcaaaa
gatggtaatatgccccatatgattatatcaggccttcctggtattggtaagactacgtcg
gttcattgtcttgcgcatgaacttttggggaaatcgtattcgcaggcagtgttggaactc
aatgcttctgatgacagaggtattgacgttgtgagaaatcagatcaagcatttcgcacaa
aagaagtgccacttgccaccgggaaagcacaagattattatccttgatgaagctgattcg
atgacagctggtgctcagcaggctttaaggagaaccatggaactatattccaacaccaca
cgattcgcgtttgcctgcaatcagagcaataagatcattgaacctttgcaaagtagatgc
gcaatcttacgatactccaaactatccgatgaacaggtcttgaagagacttatggagatc
ataaaggctgaaaatgtgtcttttacaaatgatggactggaagctatcatctttaccgca
gagggagatatgagacaggctattaataatttacaaagtaccgtggctggtcatggtcta
gttagtggtgacaacgtctttaagattgtagactcaccgcatcctttgattgtcaagaaa
atgttacttgcagatacactggaagaatctatatcacatttgaagaacgatctttgggat
aaaggatactctgctgtcgatattgtcacgacttcctttcgtgttactaagtcattgtat
caagtgaaagaagctcagagattggagatgatcaaagagataggtataacacacatgaga
atactcgaaggtgtgggtacctatttgcagctggcgagcttattagccagaatacataga
ctaagataa

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