KEGG   Torulaspora delbrueckii: TDEL_0D05940
Entry
TDEL_0D05940      CDS       T02236                                 
Symbol
TDEL0D05940
Name
(RefSeq) hypothetical protein
  KO
K12601  superkiller protein 8
Organism
tdl  Torulaspora delbrueckii
Pathway
tdl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TDEL_0D05940 (TDEL0D05940)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdl03019]
    TDEL_0D05940 (TDEL0D05940)
Messenger RNA biogenesis [BR:tdl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     TDEL_0D05940 (TDEL0D05940)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_HPS5 NBCH_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Peptidase_M30 PEP5_VPS11_N Beta-prop_Vps41
Other DBs
NCBI-GeneID: 11503545
NCBI-ProteinID: XP_003681389
UniProt: G8ZU84
LinkDB
Position
4:1076418..1077710
AA seq 430 aa
MSNIFISTTNCGKAHEADIFSVAVCVPYTITGSGDGSIKLWKNKLLDNEVPRDYHISKFV
HKTGIHHVDVFHSVEKGGHEICIISCVAFSGDIFFYEVDVKNGTLSSIDLLTAKEKKKSY
WAVKWFKSDDQIVCHRFAATDVKGNTYVWRFHPFTKELDEEEAQTEKLKREARLKRNRFQ
SLDEKIAEETSEERESQEDLILEPHLALQGEIAATEPVFATCLDISPNGLIATGFANGTI
VVSQVSTLRPIHSFEGFGIQGIEQNSNTVRDVKFSPMGTLLAVANDSGSYGCVTLYETEF
GERVGSFSVPTHSTQSSIGTFAHNGWVFGLSFNSTGEFLATCGYDSKVRVWDVKSRERVS
TINISANDVENEQEIMLEDESGDSLKYPPVFGVKFIAKGIRGGMGSDSNEGLCCVCMDRS
VRWFREAGGS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtcaaatatattcatctctactacgaattgtggtaaggcccatgaagcagacatcttc
agcgttgctgtgtgtgtaccatacacgataactggttccggtgacgggtcaatcaagctt
tggaagaacaaattgctggacaacgaagtgcccagggactaccatattagcaagtttgtg
cataaaaccggtatacatcatgtggacgtgttccactcagtggagaagggaggacatgag
atctgtataatctcgtgtgttgcgttctctggagatatattcttttatgaagtggatgtt
aagaatggtacccttagtagcatagatctgctgactgccaaagagaagaaaaaatcctat
tgggcggtgaagtggttcaagagcgatgaccaaattgtctgccatagatttgccgcaaca
gacgtcaaaggtaatacatatgtatggagattccatccttttaccaaagaactcgatgag
gaagaagctcagacggagaaattgaagagggaagctaggctaaagaggaatagattccaa
tcattggatgagaaaatcgcagaagagacctccgaagagagagaatctcaagaggattta
atcttagagccccacctggctttacaaggcgaaatagcagccacagaacctgtttttgct
acctgcctagatatttcacctaatgggttaatagctaccggttttgccaatggtactatt
gtcgtttcacaagttagcacactaagacctatccatagttttgagggttttggtatacag
ggcatcgagcagaacagcaataccgtgcgtgatgtcaaattttcacctatgggaacattg
ctcgctgtggctaatgactctggatcgtacggttgtgttacactatatgaaactgaattt
ggtgaacgtgtcggatctttctcagttccaactcatagcacacagtcgagtataggtact
tttgcacataacggatgggttttcggattgtccttcaattctaccggtgaatttctagcg
acttgtggttacgatagtaaagtgagagtatgggatgtgaaatcgagagagcgcgtatct
accattaacattagcgctaatgatgtcgaaaatgaacaggaaatcatgctagaagacgag
tctggcgattctttaaagtatcctcctgtctttggagttaaattcattgccaaaggcatc
cgtggcggtatgggtagtgattcaaacgaaggattgtgttgcgtttgcatggatcgaagt
gtaagatggttcagagaagctggcggcagttag

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