Torulaspora delbrueckii: TDEL_0D05940
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Entry
TDEL_0D05940 CDS
T02236
Symbol
TDEL0D05940
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0D05940 (TDEL0D05940)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0D05940 (TDEL0D05940)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
TDEL_0D05940 (TDEL0D05940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Peptidase_M30
PEP5_VPS11_N
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
11503545
NCBI-ProteinID:
XP_003681389
UniProt:
G8ZU84
LinkDB
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Position
4:1076418..1077710
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AA seq
430 aa
AA seq
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MSNIFISTTNCGKAHEADIFSVAVCVPYTITGSGDGSIKLWKNKLLDNEVPRDYHISKFV
HKTGIHHVDVFHSVEKGGHEICIISCVAFSGDIFFYEVDVKNGTLSSIDLLTAKEKKKSY
WAVKWFKSDDQIVCHRFAATDVKGNTYVWRFHPFTKELDEEEAQTEKLKREARLKRNRFQ
SLDEKIAEETSEERESQEDLILEPHLALQGEIAATEPVFATCLDISPNGLIATGFANGTI
VVSQVSTLRPIHSFEGFGIQGIEQNSNTVRDVKFSPMGTLLAVANDSGSYGCVTLYETEF
GERVGSFSVPTHSTQSSIGTFAHNGWVFGLSFNSTGEFLATCGYDSKVRVWDVKSRERVS
TINISANDVENEQEIMLEDESGDSLKYPPVFGVKFIAKGIRGGMGSDSNEGLCCVCMDRS
VRWFREAGGS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatattcatctctactacgaattgtggtaaggcccatgaagcagacatcttc
agcgttgctgtgtgtgtaccatacacgataactggttccggtgacgggtcaatcaagctt
tggaagaacaaattgctggacaacgaagtgcccagggactaccatattagcaagtttgtg
cataaaaccggtatacatcatgtggacgtgttccactcagtggagaagggaggacatgag
atctgtataatctcgtgtgttgcgttctctggagatatattcttttatgaagtggatgtt
aagaatggtacccttagtagcatagatctgctgactgccaaagagaagaaaaaatcctat
tgggcggtgaagtggttcaagagcgatgaccaaattgtctgccatagatttgccgcaaca
gacgtcaaaggtaatacatatgtatggagattccatccttttaccaaagaactcgatgag
gaagaagctcagacggagaaattgaagagggaagctaggctaaagaggaatagattccaa
tcattggatgagaaaatcgcagaagagacctccgaagagagagaatctcaagaggattta
atcttagagccccacctggctttacaaggcgaaatagcagccacagaacctgtttttgct
acctgcctagatatttcacctaatgggttaatagctaccggttttgccaatggtactatt
gtcgtttcacaagttagcacactaagacctatccatagttttgagggttttggtatacag
ggcatcgagcagaacagcaataccgtgcgtgatgtcaaattttcacctatgggaacattg
ctcgctgtggctaatgactctggatcgtacggttgtgttacactatatgaaactgaattt
ggtgaacgtgtcggatctttctcagttccaactcatagcacacagtcgagtataggtact
tttgcacataacggatgggttttcggattgtccttcaattctaccggtgaatttctagcg
acttgtggttacgatagtaaagtgagagtatgggatgtgaaatcgagagagcgcgtatct
accattaacattagcgctaatgatgtcgaaaatgaacaggaaatcatgctagaagacgag
tctggcgattctttaaagtatcctcctgtctttggagttaaattcattgccaaaggcatc
cgtggcggtatgggtagtgattcaaacgaaggattgtgttgcgtttgcatggatcgaagt
gtaagatggttcagagaagctggcggcagttag
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