Torulaspora delbrueckii: TDEL_0E00460
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Entry
TDEL_0E00460 CDS
T02236
Symbol
TDEL0E00460
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0E00460 (TDEL0E00460)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0E00460 (TDEL0E00460)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TDEL_0E00460 (TDEL0E00460)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TDEL_0E00460 (TDEL0E00460)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
CSL4_N
Motif
Other DBs
NCBI-GeneID:
11503690
NCBI-ProteinID:
XP_003681500
UniProt:
G8ZUJ5
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All DBs
Position
5:107189..108052
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AA seq
287 aa
AA seq
DB search
MNPEGIPFEFPDRVFPGQLICPEYEVKQQDEVDLVFKFNSGQGTRFQSFKYDGTTVNAIT
ATLVGNVKITETTCDSTANADQKASEEKLQSQGEVRKRIVKDMVVSVAQNDISETKCNVN
DDFANNLPKEDDIVLTRVTRISLQRANVEILAVENQAVPVDSGIGSNGSGIVAAGGGSGA
ATFSIAQASSDLGETFRGLIRSQDVRATERDTVKIIDSFKPGDIVRAQVLSLGDGTNYYL
TTARNDLGVVFARAVNGTGGLMYAIDWQTMAVPSTGATEKRKCAKPF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgaaggtataccgtttgaatttcctgatagagtttttccaggacaactgata
tgccctgagtatgaggttaaacagcaggatgaggtggatttagttttcaagtttaatagt
ggacaaggaactaggtttcagagtttcaaatatgatggcacgactgtcaatgcaatcaca
gcaacattagtagggaatgtcaaaattactgagactacttgcgactcaaccgctaatgct
gatcagaaagcatctgaggaaaagcttcaatctcaaggagaagttcgtaagaggattgtt
aaagacatggtcgtttcagtggcccaaaatgacatttcagagaccaaatgcaatgtcaat
gatgactttgccaataatctaccgaaggaagatgacatcgtccttacgcgagtgacaaga
atatcattacagagggcaaatgttgaaatcctcgcggtggaaaatcaagctgtacctgta
gatagtggtattggtagtaatggctcaggaattgttgcagctggtggaggatctggcgct
gccactttctccattgcccaagcttcatccgatcttggtgaaactttcagaggtcttatc
agatcccaagacgtaagagccactgagagagacaccgtcaaaataatagacagtttcaaa
cctggtgatattgtgcgggcgcaggtcctgtctttgggtgatgggacgaactactacctc
actactgcaagaaacgacctaggagttgttttcgctagggcagtaaacggaaccggaggg
ctcatgtatgccattgattggcaaacaatggcggttcctagcaccggcgctacagagaag
cggaagtgcgccaagccattctaa
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