Torulaspora delbrueckii: TDEL_0E03200
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Entry
TDEL_0E03200 CDS
T02236
Symbol
TDEL0E03200
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
tdl
Torulaspora delbrueckii
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0E03200 (TDEL0E03200)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
TDEL_0E03200 (TDEL0E03200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
11503964
NCBI-ProteinID:
XP_003681774
UniProt:
G8ZVB9
LinkDB
All DBs
Position
5:603078..606851
Genome browser
AA seq
1257 aa
AA seq
DB search
MSNHGSGNRNQEGSLYVPTTGGGKDKPEHIHVAHRRSQSELTNLMVEQFTLQKQLEMVQA
KQQQLWIHQQQLAQQTGQFGNSGNSNPQGNPNFLPPHPHFNKGAGNSSSGGSSGNSPGYR
SRSHSRNNSGYYDSGSGNNSSTPYGHKKTNSQSSGFGHARRHSLGLNEAKKAAAEEQAKR
VAGNVTVKIDTTSPTIGSNEGSEQENFASPNAYKFPAQGQGHRRTNSSSQSSSFRFPPPQ
SQYSQKENDNDGDDFTPTSTGHRRSRSRNTEFSPGINSNWRNQSQSQNQVQGQQPSPFHH
RTSNSRDFSVNSFNNLEPPAVFQAGHKHRGSNASVHSFNSQSNNGNPNARKSLFAPYLPQ
ANIPELIQEGRLVAGILRVNKKNRSDAWVSTEGVLDADIYICGSKDRNRALEGDLVAVEL
LVVDDVWDSKKEKEEKKRRKDASSQHENIPLNSNDDYHNDASATATTTTLGSSPSSSSGG
DDTTIAGGKSSGDNDEQSPTKQGVRRKNSLKQRPTQKKNDDVEVEGQSLLLVEEEEINDD
FKPLYAGHVIAVLDRIPGQLFSGTLGLLRPSQQSHNDNNKPQQAPKIVWFKPTDKKVPLI
AIPTELAPKDFVENADKYADKLFVASIKRWPITSLHPFGILVSELGEISDPNTEIDSILR
DSNFLSNEYLDPKDPKSEKSTFHSLPIAQEDLESRRQFTDQNTYDILAITESANYCDFAV
HIKNNTDDAGSIELGCHVVDATAYIEEDSSLDRRARKRSTAVFMPQKFVDLLPQALNKSL
TLAPGKESACISVVYTLDGKTLKVKSTWIGESVVQPSGTISVDDLSSKSAEANSNPSAYM
LKNIATSFYAERINFPAAELTPFLPLAASLDDEKVNVDLNILDRSLGSIIVGEIKTKLDS
SVAEKIYTKLGDSTFLRRQVQPVHTKMASFKKKVKKFGFDIDVSSADTLIKSILQIKNND
VRTGVEILLYKTMPRARYFIAGKVDPDQYGHYALNLQLYTHFSAPLRRYADHVVHRQLKS
VLKGVPYNEDLDSLKITSEYCNFKKDCASQAQEQAVHLQLCKTINDMGNATGQLLTMATV
LQVYESSFDVFIPEFGIEKRVHGDQLPLIKAEFDPANRVIELHWQPGVDSATFVPADEKN
PKSYRTSIKNKYRSKTAEIAAIEYNKGQNGESLISDSLSDELSKMNLKVPKLRLPELSRN
KDPLDSFLSTAITRKKNDNCIQEVHELQKIPVLLRAEVGMALPCLSVRALNPFLRRE
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcacggttccggcaataggaaccaagaaggttccctatacgttcctaccact
ggaggtggaaaggacaaaccggaacatattcacgtcgcccataggagatctcaaagtgaa
ttgaccaatttgatggttgagcagtttactttgcaaaaacaactagagatggtgcaggcc
aagcaacaacagctgtggattcaccagcaacaattggcccaacagacggggcaatttggt
aactcggggaacagcaaccctcaggggaacccaaacttcttgccaccccatcctcatttc
aataaaggtgctggtaatagttctagtggaggttcttccggtaactcccccggttataga
agcagatcgcattctcgaaacaattctggatactatgacagcggtagcggtaataatagc
agtaccccttacggccataagaagaccaattcgcaatcaagtggattcggacacgctaga
aggcattcactgggtttgaacgaggcaaagaaggcagcagctgaagagcaggcaaagagg
gttgctggtaacgtgaccgtcaagatcgatactacttctcctaccattggtagtaatgag
ggttctgagcaagagaattttgcctcacctaacgcctacaagtttccagcacagggtcag
ggacaccgtcgcacgaactcgtcgagtcaatcgtcttctttcagattcccacctccacag
tcccaatacagtcaaaaggaaaacgacaatgacggtgatgatttcactccaacttcaacg
ggtcatcgtcgctcaagatcaagaaataccgaattttcccctggtatcaattccaattgg
aggaaccaatctcaatctcaaaatcaggtccaaggtcaacagccatctccttttcaccat
aggacatctaattctagggattttagtgtaaactcgttcaataatttggaacctccagct
gttttccaagcaggtcataagcacaggggctctaacgcttctgttcacagttttaactca
caaagtaacaatggaaatcctaatgccagaaaatcgttgttcgcgccatatttgcctcag
gctaatattcccgaactgattcaagagggcagactggtcgctggtattctacgtgttaac
aagaagaacagatctgatgcttgggtttctactgaaggtgtactggatgccgatatctat
atctgtggttccaaggaccgtaatagagctttggaaggtgatttggttgcagttgagctg
ttggttgtcgatgacgtttgggactccaagaaggagaaggaggagaaaaagagaagaaag
gatgcgtcaagtcaacatgaaaacattcctttgaacagtaacgatgactaccacaacgac
gccagtgcaacagctactactaccactttaggatcttcgccatcctcatcctccggaggt
gatgacacaacaattgctggtggaaaatcatctggtgacaatgatgagcaatcaccaacc
aagcaaggagtaaggagaaagaattccttgaagcaacggccaactcaaaagaagaatgat
gacgtcgaagtggagggccagtcgttgttgctagttgaagaagaagagatcaatgatgat
ttcaaaccactatatgcaggacacgtcattgctgttctggatcgtattccgggtcaacta
ttcagtggaactcttggattattgagaccatctcaacagtctcataacgacaacaataag
ccacaacaagctcccaagattgtttggttcaagccgaccgacaagaaagttccattaatt
gctattccaactgaattggctccaaaagattttgtggaaaacgctgataaatatgctgat
aaactgttcgttgcctccatcaaacgttggcccattacctcattgcatcctttcgggatc
ttggtttctgagctaggtgaaattagtgatccaaatacagagatagattccattcttaga
gacagtaattttttgtcgaacgaatatcttgatccaaaggatcctaaatctgaaaaatca
actttccattctttgccgattgcccaagaagatctcgagtcaagaagacagttcacggac
caaaacacctatgatattttagccattacagagtccgcaaattactgtgatttcgctgtg
cacatcaaaaacaatactgacgacgcagggtccatcgagcttggatgtcacgttgtcgat
gcaactgcctacatcgaggaggattcttctttggatagacgagcaagaaaaagatccact
gccgtcttcatgcctcagaagtttgtcgatcttttacctcaagctttaaacaagtctttg
actttagcgcctggaaaggagtctgcttgtatttccgtcgtttatacccttgatgggaag
acactgaaggtgaaatcaacatggattggagaatccgttgtacagccttccggtaccatt
tctgttgatgacttgagctcaaagagtgctgaggcaaattctaacccgtctgcatacatg
ttgaagaatatcgcaacatctttttatgcggaaaggatcaatttcccagcagctgaatta
acgcctttcttaccactagcagcaagtttagatgatgaaaaagtaaatgtggatctcaac
atcttagacagatctttgggttctatcattgttggtgagattaagaccaagctggatagc
tctgtggcagagaagatttacacaaagttaggagattctacttttttgagaaggcaggta
caacccgttcatactaagatggcttctttcaagaagaaagttaagaaatttggtttcgac
attgacgtgagttcagctgataccttgataaaatcgatcctacaaatcaaaaataacgat
gtgcggactggtgttgagatattgttgtataagacaatgccaagagcgagatatttcatt
gctggtaaagtagatcctgatcaatacggtcactacgcgctaaacctccaactgtacacc
catttctctgcaccactaagaaggtatgcagatcatgttgttcacagacaattgaaaagc
gtgctcaaaggggtaccttacaatgaggaccttgattccttgaaaataacctccgaatac
tgtaacttcaagaaagattgtgcgtcgcaggctcaggaacaagctgttcatttacaactt
tgtaaaaccataaacgacatgggtaacgccacgggccaacttttgacaatggctacagtg
ctgcaggtttacgaatcttcgtttgatgtcttcatcccagagtttggaattgaaaagagg
gtacacggtgaccaactaccattgatcaaagcagaattcgaccctgccaaccgcgtgatc
gaattgcactggcaaccgggcgttgacagtgccacatttgtacctgctgatgaaaaaaat
ccaaaatcttacagaacctccatcaaaaacaagtatagatctaagacggcagaaattgct
gcgatcgaatacaacaaaggccaaaatggagaatcactgatcagcgactctttgagtgat
gagctttccaagatgaacttaaaggttcctaagttaagactgccggaattgagccgcaac
aaagatcctttggacagtttcttgagcactgcgatcacaaggaagaagaatgataactgc
atacaggaagtgcacgagctgcaaaagataccagtactactaagagcagaagtgggcatg
gcattgccatgtctttctgtgcgggcgcttaacccatttttaaggagagaatga
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