Torulaspora delbrueckii: TDEL_0F00440
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Entry
TDEL_0F00440 CDS
T02236
Symbol
TDEL0F00440
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03030
DNA replication
tdl03410
Base excision repair
tdl03420
Nucleotide excision repair
tdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TDEL_0F00440 (TDEL0F00440)
03410 Base excision repair
TDEL_0F00440 (TDEL0F00440)
03420 Nucleotide excision repair
TDEL_0F00440 (TDEL0F00440)
03430 Mismatch repair
TDEL_0F00440 (TDEL0F00440)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdl03032
]
TDEL_0F00440 (TDEL0F00440)
03036 Chromosome and associated proteins [BR:
tdl03036
]
TDEL_0F00440 (TDEL0F00440)
03400 DNA repair and recombination proteins [BR:
tdl03400
]
TDEL_0F00440 (TDEL0F00440)
DNA replication proteins [BR:
tdl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TDEL_0F00440 (TDEL0F00440)
DNA Replication Termination Factors
ELG1-RFC complex
TDEL_0F00440 (TDEL0F00440)
Chromosome and associated proteins [BR:
tdl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TDEL_0F00440 (TDEL0F00440)
DNA repair and recombination proteins [BR:
tdl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TDEL_0F00440 (TDEL0F00440)
Check point factors
HRAD17(Rad24)-RFC complex
TDEL_0F00440 (TDEL0F00440)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_22
AAA_19
AAA_11
RuvB_N
Mg_chelatase
AAA_16
SLFN-g3_helicase
AAA_24
AAA_14
AAA_2
ResIII
AAA_7
AAA_30
AAA_28
TIP49_C
DUF815
AAA_5
AAA_23
DNA_pol3_gamma3
bpMoxR
AAA_18
AAA_3
POTRA_1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
11501157
NCBI-ProteinID:
XP_003682066
UniProt:
G8ZW61
LinkDB
All DBs
Position
6:complement(70924..71988)
Genome browser
AA seq
354 aa
AA seq
DB search
MFEGFGSNKRRKVAPEGESESSKPWVEKYRPKKLDEVAAQDHAVNVLKKTLGSSNLPHML
FYGPPGTGKTSTILALTKELFGPELTKTRVLELNASDERGISIVREKVKNFARLTVSKPS
AKDRENHPCPPYKIIILDEADSMTADAQSALRRTMETYSSVTRFCLICNYVTRIIDPLAS
RCSKFRFKSLDAANALDRLKYIAKEESVDYEEGVLDDILKISSGDMRRAITLLQSAHKRK
GLEGSKKITPQEIEEISGLVPNSTIHELAAKIAESNIDEIAEYVNTFMKSGWSVAAVTEQ
LHNYYLVSDDYGTDFKNKVSWILFNTDSKLTNGTNEHIQLLNLVIQICEIQKNS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaggatttggttcgaataagaggcgtaaggtagctcctgaaggtgagagtgag
agttccaaaccatgggttgagaagtatagaccaaagaagctggatgaagtcgcggctcag
gaccatgcagtaaatgtgttgaagaagacccttggctcgagcaatttaccacacatgttg
ttctatggacctccagggacaggtaagacttccacgatattggctttaactaaggaatta
tttggtccggaattgacgaagacaagagtgttagagttgaacgcctcagatgagcgaggt
atatcaattgttcgtgaaaaagtgaagaattttgcaagactgacagtttccaaaccatca
gctaaagatcgtgagaatcacccatgtccgccatataagatcattatactggatgaagca
gattccatgactgccgatgctcaaagtgctcttcgtcgaacgatggaaacatactcatcg
gtaaccaggttttgtttgatttgtaattacgtcaccagaatcatcgatcctctagcctcg
agatgctcgaaatttagatttaaatctctggatgctgcgaacgctctcgatcgattgaag
tatatcgcaaaagaagagtccgtcgattacgaagaaggtgtgttagatgatatactgaag
atttcaagcggcgatatgagaagagcaatcacactattacaatcagcgcacaagcgaaaa
ggcttggaaggatctaaaaagattactccacaagaaattgaagaaatttctgggttagtt
ccgaactctacgatacatgaattagcagcgaagatagcggaaagcaatatcgacgaaatt
gcagagtatgtcaatacttttatgaaaagcgggtggtctgtcgctgccgtgacagagcaa
ctacataattattacttggtcagcgatgattatggcacagacttcaagaataaagtttct
tggattcttttcaatacggattcgaagttgacgaatggtacaaacgaacatattcaactt
cttaatttggttatccaaatatgcgagatccaaaagaattcctaa
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