Torulaspora delbrueckii: TDEL_0F00630
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Entry
TDEL_0F00630 CDS
T02236
Symbol
TDEL0F00630
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TDEL_0F00630 (TDEL0F00630)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdl03021
]
TDEL_0F00630 (TDEL0F00630)
03041 Spliceosome [BR:
tdl03041
]
TDEL_0F00630 (TDEL0F00630)
03036 Chromosome and associated proteins [BR:
tdl03036
]
TDEL_0F00630 (TDEL0F00630)
Transcription machinery [BR:
tdl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
TDEL_0F00630 (TDEL0F00630)
Spliceosome [BR:
tdl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
TDEL_0F00630 (TDEL0F00630)
Complex B
TDEL_0F00630 (TDEL0F00630)
Complex C
U2 SnRNP specific factors
TDEL_0F00630 (TDEL0F00630)
Chromosome and associated proteins [BR:
tdl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
TDEL_0F00630 (TDEL0F00630)
TFTC complex
TDEL_0F00630 (TDEL0F00630)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
APH-like_N
Beta-prop_THOC3
Bact_transglu_N_2
Motif
Other DBs
NCBI-GeneID:
11501176
NCBI-ProteinID:
XP_003682085
UniProt:
G8ZW80
LinkDB
All DBs
Position
6:complement(103366..107130)
Genome browser
AA seq
1254 aa
AA seq
DB search
MLVQESDLYLYHLTLKRQTNYVNSCIGHFIDREQDNKRSKDLQLCIATETHIELYDVANG
TLRRLIEIPIFATLTTIESFRIENSSVSLLAMTSDSGNLTIAQFHRPSLNRIALKTVLNQ
PMTRSQVRRVSPISYMTVDPYGRCLLLSAIEKNKLCFVLNTNNDGSLVIQSPLEAIRPDV
ITLDITSCDVQYDNPCFAALEIDANNYHLVFYILDLSLNHIVKKAEYKVNSEANFIMGIP
ALSKYKINCVSNTDEINPFVLVGFENYLMVKDMNGFFSLKVPLPNRNGQKATIISGALQT
LKKSFFILLQSNFGDLYKLTIEPDGNDRDKPLVSISYFDTIFQAEKLHIFKNGYLFANSE
LGDSYLFQFDSLGDDSEKITSADPGKQLRFEPTETLNNLSIVSTKKNLNPLLSTQVTNSN
PLTIAANSTRILTNGVRFEDDISSPLPPGAENIWTIKVPGESIHKLLFLGFPKSTMILEI
ESGTLEEMNSLKNPFKVKGDKSLYVAAMTDQYIIQVCENELRQVVSDKDGFTCNLKWFPP
AGIRIVCATSSETQLSIGLSNCEIVYFEITSGSLHESQNKIELDEPITSISMVRSKRSDY
LAVGSNDSTVKLISLKRSDMDEFMEIVSIQTVLAPVTDLKLIQDSNLELHIGLENGVYCR
SMVNNNDGQLYDVRTKFLGPRPVTLSCLGSISLEQSSEDEDIEEDEEEKEEGKQASTSQN
LRPAVLLHCTKTWISYTKTPLLYVRPILSGSNNLTKVCEFIADESSLNGCCAISSSGSLM
IGKLKDFSTQEEWFQVEDVSVDGSKAAHHIDGESDEEEDQDVRLGVHPYDKPILLAFQED
KRLLLNIECSRREGKGFRVSISRGGEIYTLPQGDEVFKVMEGIDVVTASLAKFSGSTDHL
VLSTRDGYLTTFVVSVDKKGKTFDFRLLHKTLIEDQVTCMIPFSDKLLVPIFGSLVLFGL
GKKQLLKQSFSETTPSITKITALANWKNQRVAVGDIRESVTLFLLDKSKNAFLPIADDIV
KRHVTTLAFLDVSTILGGDKFGNIWTLRLQSENEKTLSQCFPHAIERLQQLPPMKKYAPN
IMECPFKLTLTNMFYVNDIPMNIHILESLQMSDRPAIMYSGLQGTIGCLTPLLSRAEISN
FKTIESMMSEADERFYLKSESEVVHDDSLKEDSEFELSNKSQGDVPEGSYSIVDRDHLRY
RSYYAPVRNIVDGDLCERFIDLSYTAQKFLCAESKTLNPDTIIKIINDIRTNCM
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttcaggaatcggacctctacctgtaccatttgacgttgaagcggcaaaccaac
tatgttaactcttgcattggacatttcatcgacagggagcaggacaataaacgttcaaaa
gatctacaactttgtatcgccactgaaacccacatagagctatacgatgttgcaaatggg
accttaaggaggctaatcgaaataccgatatttgctacattaactacaatagaatccttt
cgaatcgagaactcgagcgtgtctctgttagcgatgacatctgattcagggaacctcaca
attgctcagttccataggccttctttgaacaggattgcccttaaaactgtgctcaatcaa
ccgatgacgaggtctcaggttcgaagggtgtcgccgatttcttacatgaccgttgatccg
tacggtagatgccttctgctttcagcaattgagaagaacaagctttgctttgtcttgaac
actaataatgatggatctctggtgattcagtcgcccttggaagcaataagaccggatgtt
ataactttggatatcacctcatgcgatgttcagtacgataatccatgttttgcggctttg
gaaattgatgcaaacaattatcacttggtattctacatcctggatttaagtttgaatcac
attgtgaagaaggctgagtacaaggtaaattccgaggccaactttatcatgggtattcct
gctctatcgaagtacaagattaattgtgtctccaacacagatgaaatcaatccctttgta
ctcgttggtttcgaaaactatctaatggtcaaggatatgaatggatttttcagcctgaag
gtccctctaccgaaccgtaatggtcagaaggcaacaataatttctggggcattgcaaact
ttgaagaaaagcttctttatacttctacaatcaaattttggagatttgtacaagctcacg
atcgaacccgatgggaacgatagagataaaccactggtttctatctcttactttgatacc
attttccaagcagaaaagttacacattttcaaaaacggatatttatttgctaattcagaa
ctgggtgatagctacttgtttcaatttgatagtttgggggatgatagcgaaaagattaca
tctgctgatcctggcaaacaattgagatttgagcccaccgaaacgttgaataacctgagt
atcgtctcgactaaaaaaaatctcaatcctttattatcgactcaggtgacaaattcgaat
ccactcactatagcggcaaactcaactaggattttgactaatggtgtgagattcgaagat
gatatctcctcgccattaccgccaggtgctgaaaatatctggactataaaagttcctggt
gagtcaattcataagttgttgtttttagggttcccaaaatcaacaatgattcttgagatc
gagagtggtacccttgaagagatgaacagtttgaaaaatccattcaaagtgaaaggcgat
aagtcgctatatgtcgcggcaatgacagaccagtatatcatacaagtctgcgaaaatgag
ctgcgacaagtcgtctcagacaaagatggcttcacttgcaacttaaaatggtttccgcct
gcaggtattcgaatagtttgtgccaccagctcagaaacccagctttcgatcggattatca
aattgtgaaattgtatacttcgaaatcacctctggttcattacatgagtcgcaaaataaa
attgaactagatgaacccatcactagtatctcgatggtcaggtcaaaaagaagcgattac
cttgctgtcggtagcaatgattctactgtaaagttgatctctttgaagaggtctgacatg
gatgagttcatggaaatcgtgtcaatacaaactgtattagcacctgtcaccgacctgaag
ctcatacaagacagtaatttggaattacacattggcctggagaatggtgtttactgcaga
tccatggttaataacaacgatggacagctgtacgatgttagaacgaaatttctgggacct
agaccagtgactctctcatgccttggatcaatatcattggaacaatcttctgaggatgaa
gacattgaagaagacgaagaggaaaaggaagaaggcaaacaggcttctacctctcaaaac
ttgaggccagctgttctacttcactgtacaaaaacatggattagttataccaaaactcca
ttgctctacgtccgaccaatcttgtcggggtcgaacaacttgacaaaagtttgtgaattt
atcgctgatgaatcaagccttaacggttgctgcgcaataagctcgtcaggctccttgatg
attggtaagcttaaggatttttcgacccaggaggaatggttccaagtggaagatgtcagc
gttgatgggagcaaggctgcgcatcatattgatggtgagtcagacgaagaagaggatcaa
gatgtaagactcggagtacacccgtatgataagccaatactactcgcgtttcaagaagat
aaaagactccttttaaacatcgaatgttctaggagagagggcaagggatttcgagtcagt
attagcagaggtggagaaatttatactcttccccaaggagacgaagtttttaaagtcatg
gaaggaatagatgttgtcacagcatcactggcgaagttttctggtagcacagatcatctt
gttttgtcaacaagagacggatacctcacaaccttcgtagtctctgtcgataagaaaggt
aaaacgtttgattttaggttacttcataagacgttgattgaagatcaagtaacctgtatg
attcccttctcagataagttgcttgtgccgatttttgggagtttggtcctgtttggtttg
gggaaaaagcagctactgaaacaatctttttcagaaacgacaccttccattactaagatc
accgcccttgctaattggaagaatcagcgagttgctgttggggacattcgcgagtcagtc
actctttttctgctggacaagtctaaaaatgcatttttacccatcgctgacgacatagtc
aaaagacatgtaactacgttagcctttttagatgtttcaaccattttgggcggcgacaag
tttggcaacatatggacactgagattacagagtgagaatgagaaaacattatcccaatgc
tttccacacgcaatagaaagattacaacagcttcctccaatgaagaaatatgctccgaat
atcatggaatgccctttcaaacttaccttgacgaacatgttctacgttaacgacattcct
atgaatattcatatattggagtctttgcaaatgtctgatagaccagccattatgtattct
ggactacaaggaacgattggctgcttaaccccattattatctagggcagaaatcagtaac
ttcaaaactattgagagtatgatgagcgaggcagatgaaaggttttatttgaaaagtgag
agcgaagtagttcatgatgattcgttgaaggaggattcagagttcgaactatctaacaaa
agtcaaggcgacgttcccgagggatcctattccattgttgacagagatcatctaagatac
agaagctattatgcgccagtacgcaacatagttgatggtgacctttgtgaaagatttatc
gacttatcatatacagcgcaaaagttcctttgcgcagaatccaaaacactaaaccctgat
acgataatcaagatcataaatgatattaggactaattgcatgtaa
DBGET
integrated database retrieval system
