Torulaspora delbrueckii: TDEL_0F01190
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Entry
TDEL_0F01190 CDS
T02236
Symbol
TDEL0F01190
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TDEL_0F01190 (TDEL0F01190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdl03041
]
TDEL_0F01190 (TDEL0F01190)
03009 Ribosome biogenesis [BR:
tdl03009
]
TDEL_0F01190 (TDEL0F01190)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TDEL_0F01190 (TDEL0F01190)
Spliceosome [BR:
tdl03041
]
Complex A
U1 snRNP components
U1 related factors
TDEL_0F01190 (TDEL0F01190)
Complex B
TDEL_0F01190 (TDEL0F01190)
Ribosome biogenesis [BR:
tdl03009
]
Eukaryotic type
Pre-60S particles
Helicases
TDEL_0F01190 (TDEL0F01190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
11501311
NCBI-ProteinID:
XP_003682141
UniProt:
G8ZWD6
LinkDB
All DBs
Position
6:join(211677..212937,213454..213842)
Genome browser
AA seq
549 aa
AA seq
DB search
MSRDAQFNRTNYNSRGGDFRGGRGSDRNSYNRDNNGFNGGFKNSRPFQQGPQELIKPNWE
EELQNLPTFEKNFYVEHESVGNRSEAEIAQFRKENEMTISGHDIPKPITSFDEAGFPDYV
LKEVKAEGFDKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPSIVHINAQPLLAPG
DGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRDLARGAEIVIATP
GRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE
VKQLASDYLHDPIQVQIGSLELAASHNIKQVVEVITDFEKRDRLTKHMDIASQDKESKIL
VFASTKRTCDEITKYLRDDGWPALAIHGDKDQRERDWVLNEFRTGRSPIMVATDVAARGI
DVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKGLGSSLISIMREAKQ
EIPQELLKYDRRSHGGHPRYGGGYGGRGRGRGGYGGRGRGGYGGGGRGGYGGGRGGYGGG
RGGWGNNGY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagacgctcaattcaacaggactaactataactctcgtggtggtgatttccgc
ggtggtagaggttccgataggaactcttataacagagacaacaatggtttcaacggtggt
ttcaagaattctcgtcctttccaacaaggtcctcaggaattgattaaaccaaactgggaa
gaagaattacaaaacttgcctactttcgaaaagaacttttatgttgagcatgagtctgtt
ggtaacagatctgaggcagagatcgctcaattcagaaaggaaaatgaaatgactatctct
ggtcatgacattccaaagccaatcacttctttcgatgaggctggtttcccagattatgtg
ttgaaggaagtgaaagcagagggatttgacaagccaactggtattcaatgtcaaggttgg
ccaatggctttgtctggtagagatatgatcggtgtggcagctactggttcaggtaagact
ttgtcatactgtttgccttccattgttcatatcaacgcccagcctttgttggctccaggt
gatggtccaattgtgttggtcttggctccaaccagagagttggccgtgcaaattcaaaag
gaatgttccaagttcggtaagtcttctagaattagaaacacctgtgtctacggtggtgtt
cctcgtggtcaacagatcagagatttggctcgtggtgctgagattgtgatcgccactcca
ggtagattgattgacatgttggagatcggtaagactaatttgaagagagttacctacttg
gttcttgacgaagctgacagaatgttggatatgggttttgaacctcagatcagaaagatc
gttgaccaaattagaccagacagacaaactctgatgtggtctgctacttggccaaaggaa
gttaagcaattggctagcgattatttgcacgatcctattcaagtgcaaattggttctcta
gaattggctgcttctcataacattaaacaagttgtcgaagttattaccgatttcgaaaag
agagatcgtctaactaaacacatggacatcgcttctcaggataaggaatccaagatcttg
gttttcgcttctacaaagagaacttgtgacgagattaccaaatatttgagagatgatgga
tggcctgcacttgccattcacggtgataaggaccaaagagaacgtgactgggttctgaac
gaatttagaacaggtagatcgccaattatggtggctactgatgtcgcagccagaggtatt
gatgtcaagggtatcaactatgtcatcaactatgacatgccaggtaacattgaggattac
gttcatagaattggtagaaccggtagagcaggtgccactggtactgccatctctttcttc
accgaagctaacaagggcctgggttcttctttgatctcaattatgagagaagctaagcaa
gaaatcccacaagaattgttgaagtacgatagaagatcccacggtggtcatccaagatac
ggtggtggttacggaggccgtggtcgtggccgtggtggctacggtggccgcggccgtggt
ggttacggtggtggcggccgtggtggttacggtggtggccgcggtggttacggcggtggt
cgtggtggctggggaaacaacggttactag
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