Torulaspora delbrueckii: TDEL_0F03160
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Entry
TDEL_0F03160 CDS
T02236
Symbol
TDEL0F03160
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0F03160 (TDEL0F03160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0F03160 (TDEL0F03160)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TDEL_0F03160 (TDEL0F03160)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
TetR_C_27
Motif
Other DBs
NCBI-GeneID:
11501666
NCBI-ProteinID:
XP_003682338
UniProt:
G8ZWY3
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Position
6:complement(580425..581123)
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AA seq
232 aa
AA seq
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MTTIKVSTGVLTNVDGSSQFECRDTKVLCAVTGPVEPKARQELPTRLALEVVVRPAKGVP
NTREKLMEDRLRAVLTPLIVCSKYPRQLCQITCQILEAGEDEGEFSQKELSCCINAAFLA
LIDAQLALHSFSSSVSLAVLKESGELVLNPTGDLLKVSLSAHTLALELTDGSKKVANVLL
LDSNGDFTDAQLLKVLQVGEQGCLEQAQFMRNFLAAKITDEIVRTKVNDNGN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacaactataaaagtatctactggagttcttactaacgtcgatggatcctcgcagttt
gagtgtcgtgataccaaggtcctctgcgccgtaacaggaccagttgagcccaaagctagg
caagaactgcccactaggttggcacttgaagtggttgttagacccgccaagggagtgcct
aatactagggaaaagctgatggaagatcgtctgagagcagtgctgacaccattgatcgtt
tgcagcaagtacccgcgccaattgtgccaaataacatgtcaaatccttgaagctggggaa
gatgaaggcgagttttcacaaaaggagttgagttgttgtatcaatgcggccttcttggca
ctcattgatgcccagcttgctttacatagtttttcttcaagcgtatcgctggctgtgttg
aaggaatcaggcgaattagtgctgaatcctactggcgatctgttaaaagtgtcgctatca
gcacacacacttgctttagagctcacagatggtagtaagaaagtggcgaatgttttgctg
ctcgatagtaatggagacttcaccgatgcacaacttttgaaggtcttacaagttggtgaa
caaggctgtctagaacaagcacaattcatgagaaacttcctggctgcaaagataacagat
gaaatagtacgaacaaaggtaaatgataatggtaattga
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