Torulaspora delbrueckii: TDEL_0G03140
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Entry
TDEL_0G03140 CDS
T02236
Symbol
TDEL0G03140
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03013
Nucleocytoplasmic transport
tdl03015
mRNA surveillance pathway
tdl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TDEL_0G03140 (TDEL0G03140)
09122 Translation
03013 Nucleocytoplasmic transport
TDEL_0G03140 (TDEL0G03140)
03015 mRNA surveillance pathway
TDEL_0G03140 (TDEL0G03140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0G03140 (TDEL0G03140)
03041 Spliceosome [BR:
tdl03041
]
TDEL_0G03140 (TDEL0G03140)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TDEL_0G03140 (TDEL0G03140)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TDEL_0G03140 (TDEL0G03140)
Spliceosome [BR:
tdl03041
]
Complex C
Other components
EJC/TREX
TDEL_0G03140 (TDEL0G03140)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TDEL_0G03140 (TDEL0G03140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
11504976
NCBI-ProteinID:
XP_003682892
UniProt:
G8ZXR4
LinkDB
All DBs
Position
7:587922..589256
Genome browser
AA seq
444 aa
AA seq
DB search
MSHEGEEDLLEYSDNEQEIQVDSKEAASAEVAKETDAEATGEANNADNDKKGSYVGIHST
GFKDFLLEPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ
QLDPVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPIAKDAELLKNKE
TAPHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQ
VMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAKLLD
DLEFNQVIIFVRSTSRANELTKLLNASNFPALTVHGHMKQEERIARYKAFKDFEKRICVS
TDVFGRGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSTKEDEEVLTKI
QERFDVKIAEFPEEGIDPSTYLNN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgaaggagaagaagatctactggagtactccgacaatgaacaagagattcag
gtagactctaaggaagctgccagtgccgaagtggccaaggagactgacgctgaggctact
ggtgaagccaacaatgcggataatgataagaagggctcttacgtgggtattcactcgact
ggtttcaaggatttcttgttggaacctgaattgtccagagctatcattgattgtggtttc
gagcatccttctgaagttcaacagcacaccattcctcagtccattcatggtaccgatgtt
ctatgtcaagctaagtctggtttgggtaagactgctgtctttgtgctgtccactttacaa
caattggaccctgtcccaggagaagtttctgttgtggtcatctgtaacgcaagagagttg
gcttatcaaatccgtaatgagtatttgagattttccaagtatatgcctgatgttaagact
gcggttttttacggtggtactccaatcgctaaggatgctgagcttctaaaaaacaaggaa
accgctcctcatatcgtggttgctactccaggtcgtttgaaggctttggttagagataag
ttgatcgatctttcccacgttaagaactttgtcattgatgagtgtgacaaggttttggaa
gaattggatatgagaagagatgttcaagaaattttcagagccactccaagagataagcaa
gttatgatgttctctgctactctatcgcaggaaatcagaccaatttgtagacgttttttg
caaaacccattggaaatctttgtcgacgatgaggctaagttgactctacatggtttgcaa
cagtactacatcaagttggaagaacgtgagaaaaaccgtaagttggctaaactattggac
gacctagagtttaatcaagttatcatctttgtgagatctacttcaagagctaacgaattg
accaaactattgaacgcttctaacttcccagctttgactgtccacggtcacatgaaacaa
gaagaacgtatcgctcgttacaaagcttttaaagattttgaaaaacgtatctgtgtgtcc
accgatgtctttggtagaggtatcgatattgagcgtattaaccttgctatcaattacgat
ctaaccactgaagctgaccaatacctgcaccgtgtcggtagagctggtagattcggtacc
aagggtttggccatttcttttgtctctacaaaggaggacgaagaagttttgaccaagatt
caagaacgttttgatgtcaaaattgccgaattcccagaggaaggtattgacccatcaact
tacttgaacaattag
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