Torulaspora delbrueckii: TDEL_0G03980
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Entry
TDEL_0G03980 CDS
T02236
Symbol
TDEL0G03980
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TDEL_0G03980 (TDEL0G03980)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdl03021
]
TDEL_0G03980 (TDEL0G03980)
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0G03980 (TDEL0G03980)
Transcription machinery [BR:
tdl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TDEL_0G03980 (TDEL0G03980)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TDEL_0G03980 (TDEL0G03980)
U7-dependent histone pre-mRNA processing factors
TDEL_0G03980 (TDEL0G03980)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
MPN635_N
Motif
Other DBs
NCBI-GeneID:
11505139
NCBI-ProteinID:
XP_003682976
UniProt:
G8ZXZ8
LinkDB
All DBs
Position
7:723679..726006
Genome browser
AA seq
775 aa
AA seq
DB search
MDALGKNSLKFFALGGGNEVGRSCHILQFKGKTIMLDAGVHPAHQGYSSLPFYDEFDLSK
IDVLLISHFHVDHAASLPYVMQKTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGVSSGGK
DDNLYTDEDLAESFDRIETIDFHSTVDVNGIKFTAYHAGHVLGAAMFQIEIAGVRILFTG
DYSRELDRHLNSAEVPTLPSDVHIVESTFGTATHEPRVNRERKLTQLIHSTVSRGGRVLL
PVFALGRAQEIMLILDEYWTQHSDELGGGQVPIYYASNLAKKCMSVFQTYVNMMNDDIRK
KFRDSQTNPFVFKNISYLRNIDDFQDFGPSVMLASPGMLQSGLSRDVLEKWCPEDKNLVL
ITGYSVEGTMAKFLMLEPDTIPSINNPEATIPRRCQIEEISFAAHVDFRENLEFIEKISA
PNIILVHGESNPMGRLKSALLSNFASLRGSEQEVHVFNPRNCVDVTLEFNGIKIAKAVGN
IVDDIRREEEEGTEVKEEDKDNAVEKTSVKKEKPDEDVEELPNGDEQEIVVSGILVSDEK
NFDLNLVSLTDLREHHTELSTTVLRERQTVHVDCKKELIYWHLCQMFGDIRVIIDEENVT
NKLKREDADGRISDGKLNGKLVLKVMNDIKLTVFDNVATLEWTQGLISDTVADSIVAILM
SVDSSPASVRMSSRSCEHHHEEFSDGVMPKDPVWKVKQIAKLFKEQFGETFTLMLAKGDD
HKIEDGDIFGVITIGKNNARINFSKMQIEECNSNPLKGRVERILDMGADLAASLC
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgttgggtaagaattccttgaagttcttcgcgctcggcggaggtaatgaagtc
ggcaggtcatgtcacatcttgcagtttaagggcaagactattatgttagacgcaggtgtc
catccagctcatcaaggttattcatccctgccattttatgacgaatttgatttgtcaaag
atcgacgtcttgttgatttcccatttccatgtggatcatgcagcttcccttccatatgta
atgcaaaagaccaatttccaaggtagagtcttcatgacacatccaacaaaagccatttac
agatggctattaagagatttcgtgagggtgacaagtataggtgtatcatctggcggcaag
gatgataatttgtacacggacgaagatcttgccgaatcatttgacaggattgaaacaatt
gatttccattcgacagtggatgtgaacggtataaaattcacagcgtaccacgcaggtcat
gttcttggtgccgcaatgtttcagatcgaaattgccggtgtgaggatcttattcactggt
gattattcgcgtgaactagatcgacacttgaactctgccgaagttccaactctgccttcc
gatgttcacattgtcgaatccacatttggaacagctacgcatgaaccccgtgtaaaccgt
gagcgtaagttgactcaattaattcattctacagtatcgcgtggaggtcgtgtcctgtta
ccagtgtttgcgcttggaagagctcaggagattatgttgatcttagatgaatattggact
cagcattctgatgagctgggtggtggtcaggttccgatatactatgcctctaatttggct
aagaaatgtatgagcgtattccagacttatgtcaacatgatgaacgacgatattcgcaag
aagtttagagactcgcaaacaaatccattcgtcttcaaaaacatctcatatcttaggaac
atcgatgattttcaggattttggacctagtgtcatgttggcatctcccggtatgcttcaa
agtgggctctctagggatgttctagaaaaatggtgcccagaagacaagaatcttgtgctg
atcactggttactctgtggaagggactatggcaaaatttttgatgctagagcctgataca
atcccatccatcaataatcccgaagcgacaataccaaggcggtgtcaaattgaagagatt
tcatttgcggctcatgttgatttccgagagaatctagagttcatcgagaagatcagtgca
cccaatatcatccttgtccatggtgaatcaaacccaatgggtcgtctgaaatccgccctc
ttatctaattttgcatccttgagaggaagcgagcaagaagtgcatgtgtttaatccaaga
aattgcgtcgatgtcacattagagtttaacggaatcaaaattgcaaaggctgtgggtaat
atcgtcgacgatatacgaagggaagaagaagaaggtactgaagtgaaggaagaagataaa
gataatgctgttgagaaaacaagtgtaaagaaagaaaaaccagatgaggacgttgaggaa
ctgccaaatggcgatgaacaagaaattgttgtttcagggattttagtgtcggatgagaaa
aattttgatttgaatttagtttcactaacggatttgagagaacaccataccgagttgtca
accacagtgctaagagagcgtcaaacagtccacgtggactgtaaaaaggagctcatatac
tggcacctttgccaaatgtttggagatattcgagttatcattgatgaagaaaacgttacg
aataagcttaaaagggaggatgctgatggaagaatatctgatggaaaactaaatggtaaa
ctggtattaaaagttatgaatgacataaaattgaccgtattcgacaacgtggcgacatta
gaatggacgcaaggtctgataagtgatactgtcgcagattcgattgttgctatactcatg
agtgtcgattcttcgccagccagtgtgcgaatgagcagtcgctcttgcgagcatcatcat
gaagagttttcggatggtgtaatgccaaaggatccagtatggaaggtgaagcaaatcgca
aagcttttcaaggagcagtttggtgaaacattcaccttgatgcttgcgaagggagacgat
cacaagatagaggatggtgacatttttggagtaattacgatcggtaagaacaatgcccga
attaacttctccaagatgcagatagaagagtgtaattccaacccactcaaggggagagta
gaaagaattttggatatgggggcagatttagcagcatctttatgttaa
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