Torulaspora delbrueckii: TDEL_0H00250
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Entry
TDEL_0H00250 CDS
T02236
Symbol
TDEL0H00250
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0H00250 (TDEL0H00250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0H00250 (TDEL0H00250)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
TDEL_0H00250 (TDEL0H00250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_8
TPR_2
TPR_16
TPR_14
TPR_11
TPR_1
TPR_CcmH_CycH
TPR_12
TPR_17
ANAPC3
TPR_9
TPR_10
TPR_7
ARM_TT21_N
Alkyl_sulf_dimr
TPR_MalT
bMG6
Motif
Other DBs
NCBI-GeneID:
11505355
NCBI-ProteinID:
XP_003683095
UniProt:
G8ZZ40
LinkDB
All DBs
Position
8:complement(33258..37451)
Genome browser
AA seq
1397 aa
AA seq
DB search
MSTVKELLKEAKTELAREDYEEAVSISKKVLNLDQSNYFAQVFLGKSYSCIEGKSKDSVE
HYKAAIELAPDNLLAWKGLIQFLNSPNIVPDVVSYDEYFDLSSEYARLLLEQEQSQVELI
HNIRTFIKKVPGSKESFLWHMIPGSPTAERLGRHLITPQEALRKLISILDANQKVHISKI
VSRERLKLSAQDPEYQMKMNSLAWDVYKDSRIEFLYNQLVNITDDDDLRAELESEWLEYR
ILVLKSMPKELKSSYFIDVKRMVEDMVLVDHRSPLAWKLFFEWQDYSDLDNMDQQLILKF
FKKFPIEPLAIILYAWLSSIFSKYDMKKLNITPNQSIEHEDARDLADFDEGEKNALNEMM
EKENEVAGLLEEEVVDALLENISKAQNSILANRVVSQYYVYSREYEAALPYVKTGISVIA
YKIRDLGGRFVNSKKQFTLSLAILYTYIDAPKNHNAAMSLFEKVLTDDPENTHAKLGKGL
IFVEREEWANANALLNEVALEFPNNMEVMSELGWNEAQLGNLEHALSIFKSVLENIEGTD
LRAVEFRALNIWRQAKVHIMIEQREPTKDHDNVRYAFKQLVSSIKILDTFSASYSTLGDI
YSIFFSDKARAFKCYYKAFELDAGDIVAAKYMSENYADLSNWQAASTVAKRLLGSEKAKR
KSKEVNWAYRVVGIFYLETQEEASSIEWFQSALRIDPKDVESWVGLGQAYYACGRIEASM
KVFERALELDSEHQHCRYLKAQSLAALGQFVDSIQVLRDIAAVAPSEEIYQVALASALVS
YALDLYSQGLLKKAMSVAENVIEVLQYATTELGCHAQNLWLALMRSLNLYVLVASEVDRL
PIESLVSICNSAKISDFTKELDDQDEVTLDNLLSGNDDSNISIACKFLILSAKYAVSTAA
FDQLPRTARSSLWYNVGSAELTAYNISKQMNYRDAAITSYKKSIQYQSNTPESWIGLGIA
TMDVNYRVAQHCFIKASALAPKELDVWFNLAMLALKNNDVEFAREVLKRSQSLSPQSSSP
WLGIALINEREGDLVESYKMFGHAFVLSNGRSKAAQLLYAKSVLQHRIGNSTDERDLEVV
EELTAAAYGLDQYFKENPDDDFALQCALLIFERLRIFSKAQDAALKLAESLEAKFERAQD
EKALFNYAVIKSQTARIQLGFGNYTAAIDDANVSQSVLTEFDDDERSTVTLSNHVSLALA
YFFSGDFDETLQHLQELLKLSKISRHLIILIAKILYEVGSDDAKDIALEELMEYVGVNGA
DLPVSLTIAAISILENRKGDLNTILAEFTELPLSDLIADKHRDVPYLIEQIKNRLEIQTD
AKSTWQRACFLFMNDHKAWLSVDQKIEQRISADGQNKVTAQQLSESYCAQRDLRTIQRSL
FLCPTNLTALQSLRQCF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggtaaaggaactcttgaaggaggcaaagactgagctggctagagaggactat
gaagaagctgtcagtatatcgaaaaaagtgctgaatctcgaccaatctaactattttgct
caggtattcctaggtaagtcatactcctgcattgaaggaaagagtaaggattctgttgaa
cactataaagcagccattgagctagctccagacaatctactggcctggaagggtctcatc
caatttttgaacagtccaaatatagtgcccgacgtggtatcttacgatgaatacttcgat
ctcagtagtgaatacgcccgactgttacttgaacaagaacaatcgcaagtggaactaatt
cataacatacgcacattcatcaagaaagtcccaggtagtaaggaatccttcctttggcat
atgatccctggttcgccaacggcggaaagacttggccgccatttaattactcctcaggag
gctctaagaaaactaatttcgattttagatgcaaatcaaaaggttcatatctcaaagatt
gtcagtcgtgagaggttaaagttgagcgctcaggatcccgagtaccagatgaaaatgaac
tctctggcttgggatgtttacaaggattcaaggatcgagtttctgtacaatcagctggtg
aacattactgatgatgatgatttgagagctgaacttgagagtgaatggttagaatataga
attttggtactcaaatccatgcctaaagagttgaaaagctcatattttatagacgtcaaa
agaatggtagaagacatggtgttggtggatcataggtcaccgttagcatggaaattgttt
ttcgaatggcaagattactcagatctagataatatggatcagcaactcatcttgaaattt
ttcaagaaatttcccatagagcccttggcaatcatactttatgcttggttatcgtcaatc
ttttcgaaatatgatatgaagaagctcaatattacacctaatcaatcgatagagcacgaa
gatgcccgagatttggctgacttcgatgagggcgaaaagaatgccctcaatgaaatgatg
gagaaggagaacgaggttgcaggtcttttagaagaagaagttgttgatgcgttgctcgaa
aatatatcaaaagctcaaaacagtatcctcgctaatcgtgtggtttcgcagtactacgtc
tattcaagagagtatgaagctgccttaccatacgttaaaactggtatatctgtgattgca
tacaaaatcagagatttggggggtcgattcgtcaactctaagaagcaatttaccttgagt
ctagcgattttatatacttacattgatgctccgaagaatcataatgcggcaatgagctta
ttcgaaaaggtgctgacagatgatccagaaaacacacatgcaaagttggggaaaggccta
atttttgttgaaagagaagaatgggccaatgcgaatgctttactgaatgaagttgctctg
gagtttccaaataatatggaggtgatgtctgaactgggatggaatgaagcacagcttggt
aatttggaacatgccttgtctatcttcaagagtgttttagagaatattgagggaacggac
cttcgtgcggttgaattcagagctttgaatatatggagacaagctaaagtgcatatcatg
atcgaacaacgggagccaaccaaagaccacgataacgtgagatatgcttttaagcagctg
gtgagctctattaaaatcttggatacattttctgccagttattccactctgggtgatatt
tactcaatcttcttttcggataaggccagagcttttaagtgttattacaaagcttttgaa
cttgatgcgggggacatcgttgctgccaagtacatgtcggaaaactatgctgatttgtct
aactggcaagctgcctccactgttgcgaaaaggctgttgggctcagaaaaggctaaacgg
aaatcaaaagaagttaattgggcatatagggttgtggggatattttacctagaaactcaa
gaagaagcatcttctattgaatggtttcaatctgctctacgaattgaccccaaagatgtt
gagtcatgggtcggtttaggtcaagcatactacgcttgtggtcgtattgaagcttctatg
aaagtttttgaaagggctttggaattagattctgagcatcagcattgtcggtacctcaag
gcacaatcgttggcagctcttggtcagtttgttgatagtattcaagtcttgagagatatc
gcggctgttgccccatcagaagagatttatcaggttgcactagctagtgcattggtgagt
tatgcacttgatctttattctcaaggacttttaaagaaggcgatgtcagttgctgaaaat
gtaatcgaggtacttcagtacgcaaccacagaattaggatgtcacgcacagaacttatgg
ctggcactgatgaggtcattgaatctctatgtgctagtcgcctcggaagttgatagacta
cctatagagtccttagtctcaatctgcaatagcgctaaaatatcagattttactaaggag
cttgacgatcaagatgaggtcacattggataacttgctttctgggaatgacgatagtaac
atatccattgcttgtaagttcttgatcctatcagccaagtatgcggtctctacagccgct
tttgatcagctccctaggaccgcaaggtcgtcgctgtggtataatgttgggagcgcggag
ctgacagcctacaatatttctaaacaaatgaactatagggacgccgctatcacttcttac
aagaaatctatccaataccaatccaacacacccgaatcgtggatcggtttggggatagca
actatggacgttaactacagggttgcacaacattgctttatcaaggcctctgcacttgcg
cccaaggaattggatgtgtggttcaatctagcaatgctggctttaaagaacaacgatgtg
gagtttgcgagagaagtgctcaagaggtcccaaagtctttctccgcaaagttcctcacca
tggttagggattgctctcatcaacgagagggaaggagatcttgtggaaagctacaaaatg
tttggtcatgcattcgtactgtccaatgggagatccaaggcagctcaactgctttatgca
aaaagcgttctccagcatcgtatcggtaattcgaccgatgagagagacctagaggttgtc
gaagaattgacagcggcggcctatggtctagaccaatatttcaaagagaaccctgatgac
gacttcgccctccaatgtgctctactcatctttgaaaggctccgcatattctctaaagcg
caagatgctgcgttgaaactggcagaatctttggaagcaaagtttgagagagctcaagac
gaaaaagctctgttcaattatgctgttatcaagtcacaaactgctcgtatccagttaggc
tttggaaattatacggcggccattgatgatgcgaatgtatctcaaagtgttttgacggaa
ttcgatgatgatgagagatccacggtgactctatcgaaccatgtgtctctggcgttggcg
tattttttctctggtgactttgacgaaactttacagcatcttcaggagctgttaaagtta
tcaaaaatctccaggcatctaataatcttgatagcgaagattctgtatgaggttgggtca
gatgacgcaaaagatattgccttggaagagttgatggagtatgtgggagttaatggagcc
gatctgccagtaagtctcacaattgcggcaatatccatacttgaaaataggaaaggtgat
ctgaataccattcttgccgagtttactgaactacctctgtcagatctcatcgccgacaaa
cacagagatgttccttatttgatagagcagataaagaaccgtcttgaaatacagaccgac
gcgaaaagcacatggcaaagagcttgcttcctattcatgaatgatcataaggcttggttg
tctgttgaccagaagattgaacaaagaattagtgctgatggtcagaataaggtcacagct
cagcagctaagtgagtcctactgcgctcagagagacttaagaactattcaaagaagtctg
ttcctctgccccactaaccttacggctctacaatctttaagacagtgtttctag
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integrated database retrieval system
