Torulaspora delbrueckii: TDEL_0H02330
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Entry
TDEL_0H02330 CDS
T02236
Symbol
TDEL0H02330
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0H02330 (TDEL0H02330)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0H02330 (TDEL0H02330)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TDEL_0H02330 (TDEL0H02330)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TDEL_0H02330 (TDEL0H02330)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
11501256
NCBI-ProteinID:
XP_003683303
UniProt:
G8ZZP8
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All DBs
Position
8:complement(391361..393799)
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AA seq
812 aa
AA seq
DB search
MAHRKLQQEIDRVFKKINEGLEIFDTYYERHENCTNNPSQKDKLESDLKREVKKLQRLRE
QIKSWQSSPEIKDKDSLLDYRRSVETAMEKYKAVEKASKEKAYSNISLKKSDLLDPQERE
RRDVSEFLSGTIDELERQYDGLQVEVDRLILLNKKKKTASSANEQQKEQLKALQARYRWH
QQQIELALRLLANEELDPDSVKEVQDDINYFVDSNQDPDFVEDETIYDALNLQSNEAIAH
EVAQYFASQLAEDNADEEDSRDASRLSKKEQRKLERDAKKAAKAAAKSKPEEEVPASPVD
ESEAVELPKSKSASPEQKTTEPLKSVPSSAAVPATTKSPNGLGATIPKASLTSSTPSNNN
HESHSGHTHIHQSLNGVTTTSTLKPATVPIRPAGELKWAVAASQGVEKDKKISSSISATN
VAGTVNNQTTASSTSASSAISSRATSATNTPRLAAQSLEPSNLAQLDNSAYGSSNSLSAN
TAAAVLAAGAAAVHLNNKAIHRNNSSSHQLAEALNYRNLSGDSSSKADLNQTENLEDVSA
PDLVIDDYEPELTDDEIENEPVPEHLSAEEYIKRTEAKEQMRKELIEDYELLLLPSGIQE
FIMGTHLFTKGLEPLDGKVGGFRRSCDTCNIPRFDEVPLGVNPPAPLDAFRSTQQWDITR
CSLRSIIQNGDLNDDEKYEAIIEKFRSLEMFTLFYNYYFAVTPLEQTIASLVLSERNWKV
SKSGTLWFLRQGEPKFANEVCEVADYKIFKLDDWTVADKPNFKLDYAALKEAPATLPSAQ
KDQSIDTNGLNDLSHGQQLLQQLKQGKIAVSD
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcgtaaattgcagcaggagatcgatagggtatttaaaaagatcaacgaaggt
cttgaaatattcgatacttactacgaaagacatgagaattgtacaaataatccctctcag
aaggataaattagagtctgaccttaagagagaggtgaagaagttacaaagactccgggaa
cagataaaatcatggcaaagttcaccggaaattaaggataaggactctttgctggattat
aggcggtctgtggagacagcgatggaaaaatataaagcggtagagaaggcatcaaaggag
aaagcttattccaacataagcctgaaaaaatctgaccttctggatccgcaggaacgagag
cgaagggatgtatccgagttcttatccggtacaatcgatgagctagaaagacaatatgat
ggtctacaagtggaggttgatagactgatattgctgaataagaagaaaaagacagcatcg
tcggcaaatgaacagcaaaaggagcaattgaaggcgttgcaagcaagatataggtggcat
cagcaacaaattgaactagctctgcgacttctcgcaaatgaagaattggatcctgatagt
gttaaggaagtacaggatgatatcaactactttgtagattctaatcaggatcctgatttt
gttgaagatgaaacgatttatgacgcactaaacttacagtcgaatgaagctattgcacat
gaagtggcccagtactttgcgtcgcaattggctgaggataatgccgacgaagaggactca
agggacgcctccagactctccaagaaggagcaaaggaaacttgagagagatgccaagaaa
gctgcaaaggcagctgcaaagtcgaaacctgaggaagaggtaccagcgtcaccagttgat
gaatcggaagctgtggagctgcccaagagtaaatctgcctcaccagaacagaaaacgaca
gaaccactgaagagtgtgccgtcgtcagctgccgtgccagctacaacaaagagcccgaac
gggttgggtgccactattccgaaggcaagcttgacttcatctactccaagcaacaataat
catgaatcgcacagtgggcatacgcacatccaccaaagcctcaatggtgtaaccacaacc
agcaccttaaagcccgccacagtaccgataaggcccgctggtgagttgaagtgggctgtt
gccgcttctcaaggtgttgaaaaggacaagaaaatttcgtcatctatatcagcaacgaat
gttgcaggaacggttaataaccaaacgactgcatctagcacatctgcatcttctgctatc
agcagtagggctacgagcgctaccaacacacctagattggctgcacagtcattggagcca
tctaatttagcacagctggataactcagcctatggtagcagcaactcactatcggctaat
actgcagcggctgtactagcagctggagcagcagccgtacatctgaataacaaagccatt
cacagaaataacagctcatcccatcagctagcggaagctctcaattacagaaacttgagc
ggggactcaagctcgaaagcagacctgaatcaaaccgagaacttggaagatgtgagcgct
ccagacctggtgattgatgattatgagcctgaactaactgatgacgagattgaaaacgaa
ccagttccagagcatctaagtgccgaggagtacattaaacgcactgaggcaaaggaacag
atgaggaaagagctcatcgaggactacgaactattgctgctgccaagtggaatccaagag
tttatcatgggtacgcacttattcaccaagggtctagagccactagatggcaaagtgggg
ggcttcagacgttcctgcgacacttgcaacataccaagattcgatgaggtacctctggga
gtcaaccctcctgctcctctagatgcctttaggtctacacagcaatgggatataactcga
tgttcgttgagatctatcatccaaaatggagatttaaatgacgatgagaagtacgaagca
ataatagagaagtttagatctttagagatgttcacgcttttttataactactacttcgca
gtcactccgttggaacagacgatagcttcccttgtattgagtgaaagaaattggaaggtc
tcgaagagcggtactctttggttcttaaggcagggagagcccaaattcgctaatgaagtt
tgtgaagtagccgattacaagattttcaaattggatgattggactgtagcggataagcct
aacttcaagttggactacgctgctttgaaggaagcaccggctacactaccttcggctcaa
aaagatcaatcgatcgataccaatggattgaatgatctgagtcatggtcaacaacttctg
cagcagctaaagcagggcaagattgctgtgtctgattaa
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