Sulfurimonas denitrificans: Suden_0141
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Entry
Suden_0141 CDS
T00298
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tdn
Sulfurimonas denitrificans
Brite
KEGG Orthology (KO) [BR:
tdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdn03009
]
Suden_0141
Enzymes [BR:
tdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Suden_0141
Ribosome biogenesis [BR:
tdn03009
]
Prokaryotic type
rRNA helicases
Suden_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
Cas3-like_C_2
PRAI
CMS1
PTase_Orf2
Helicase_RecD
adh_short
hGDE_central
Motif
Other DBs
NCBI-ProteinID:
ABB43422
UniProt:
Q30UA9
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All DBs
Position
145563..146936
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AA seq
457 aa
AA seq
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MNNAKEFSNLNLTKEMLHNLNEIGYTKMSDIQEQSLPFILDGKDVIAQAKTGSGKTAAFG
IGLLHKLQVKKFRVQALILCPTRELSDQVARELRVLARFSHNIKILTLCGGVAFGPQLGS
LRHGAHIIVGTPGRILKHLKKDTLSLEDVDTLVLDEADRMLDMGFSEEINEVLEFVPKNR
QTLLFSATYTDEILDISKSIQNGAIHVKTTSTEIANKIEERFYEVNNADKIKTVIDILSN
FRPQNVIIFANTKVEVDEIAKRLQESKVDALAIHGDLEQYDRNDVLVQFANKSCPVLVAT
DVAARGLDIKELSMVINYDLPHSLETYTHRIGRTARAGAEGLAFTLYSAYEEEKVDEYKN
DNRIFESSKTLKTVSGFVMKPQNITLVIEGGKKDKVRAGDILGALTGEAGLSGSSIGKID
IYDRQSYVAIEASKIDEAHDKLKSGKIKGKKFSVWIL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacgcaaaagagttctcaaatctgaatctaactaaagagatgcttcataactta
aatgagataggttatacaaagatgagcgatattcaagagcagagtttgccttttatattg
gatggtaaagatgtaatagctcaggccaaaacaggaagtggcaaaacagctgcgtttggt
atagggctacttcataaacttcaagtaaaaaagttcagagtccaagctcttatcttatgc
ccaactcgtgaactctcagatcaagtagcccgtgagctaagagttctcgctagattttca
cacaatataaaaattttaactctctgtggaggcgtggcatttggtccacaacttggctca
cttcgtcatggcgcacatatcatagtcggtactccaggacgtattttaaaacacttaaaa
aaagatactctatctcttgaagatgttgatacgcttgtgcttgatgaagcagacagaatg
cttgatatgggatttagtgaagagataaatgaggttttagagtttgttccaaaaaacaga
caaacactgcttttctcagcgacctatacggatgagattttagacataagcaagtctata
caaaatggtgccatacacgtaaagacaacttcaactgaaatcgccaacaagatagaggaa
cgattttatgaggtaaataacgcagataaaatcaaaacagttatagatattttgagcaat
ttcagacctcaaaatgtgattatctttgctaacacaaaagtagaagtggatgagatagca
aaaagacttcaagagagtaaagtcgatgcactggcaattcatggtgatttagagcagtac
gacagaaacgatgtgttagttcagtttgctaacaaaagttgccctgtgttagtagcaact
gatgttgccgcacgtgggcttgatataaaagaactctctatggttataaactatgacctg
cctcactctcttgaaacatatactcaccgcataggcaggacggcaagagctggagctgaa
ggattggcatttacgctttatagtgcttatgaggaagaaaaagttgatgagtataaaaat
gacaatcgtatctttgaatcaagcaaaacactaaaaactgttagtggttttgttatgaag
cctcaaaacatcactcttgtaattgagggtggcaaaaaagataaagttcgtgctggagat
attttaggcgcattaacaggagaagcgggacttagtggtagctcaattggtaagatagat
atttatgacagacagagctatgtagccatagaagcctctaaaatagatgaagcacatgat
aagctaaagagtggaaaaataaaaggtaaaaagttctcagtttggattctctaa
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