Sulfurimonas denitrificans: Suden_0468
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Entry
Suden_0468 CDS
T00298
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tdn
Sulfurimonas denitrificans
Pathway
tdn00300
Lysine biosynthesis
tdn00470
D-Amino acid metabolism
tdn01100
Metabolic pathways
tdn01110
Biosynthesis of secondary metabolites
tdn01120
Microbial metabolism in diverse environments
tdn01230
Biosynthesis of amino acids
Module
tdn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Suden_0468
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Suden_0468
Enzymes [BR:
tdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Suden_0468
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABB43749
UniProt:
Q30TD2
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All DBs
Position
470650..471861
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AA seq
403 aa
AA seq
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MINFKELAATYKTPLYVYDLDYMSAQYEELKSAFKGRKSIMAFAIKSNSNLSVIKHFATL
GSGADCVSIGEVYRAVLAGVPNYKIIFSGVGKSDDEITQAIKLDILYINVESEAELGRVE
LIAKELGAKCRISIRVNPNIDPQTHPYISTGLHDNKFGVEIDTAKRMYIKANNSEYLDPV
GIHFHIGSQLTELKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYKDETTITPYD
YAQAILSTLKGLDLTVICEPGRFLTANGGYFLTKVLYEKRNGDKRFVVVDGGMNDLLRPS
LYKAYHKIEAITESLTKLSEADVVGPVCESGDFFAKGYLLPTLEHNDLLVIHSAGAYGFG
MGSNYNTRGRSAEVAIKGKEVKLIRKREEFEDLIALEKEYLDN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgataaattttaaagaactagcagccacttataaaacacctttgtatgtctatgattta
gactatatgagtgcacaatatgaagagttaaaaagcgcttttaagggtagaaaatctatt
atggcatttgctataaaatcaaactcaaatcttagtgttattaaacattttgctacttta
ggaagtggagctgattgtgtctctattggtgaggtatatcgtgccgttttagcgggagta
cctaactacaaaatcattttctctggagtcggaaagagtgatgatgagattactcaagct
attaagttagatattttatatattaacgtagagagtgaggcagagcttggccgtgtagag
cttatagcaaaagaacttggtgcaaaatgtagaataagcatcagagtaaatccaaacata
gacccacaaactcacccttatatatcaacagggcttcacgataacaagtttggagtagag
atagatactgctaagagaatgtacataaaggcaaataactctgagtatttagacccagta
ggtatccactttcatataggttcacagcttacagaactgaagcctatatatgagtcggca
gagattgtagctgatttagtgcgttcacttcaaaatataaaaatagagctaaagtttttc
gatataggcggaggtctcggagtaaaatacaaagatgagacaacgataactccatatgat
tatgcacaagctattttatcaactctaaaaggtttagatttaacagttatttgtgaacca
ggaagatttttaactgcaaatggcggatattttttaactaaagttctttatgaaaaaaga
aatggcgataaaagatttgttgtagttgatggcggtatgaacgatttattgagaccaagt
ttatataaagcgtaccataaaatagaagcaattactgagagtttgacaaaacttagtgaa
gcagatgttgtaggaccagtttgtgaaagtggtgatttttttgcaaaagggtacttgctt
ccaactctagagcataacgatctcttggtaattcacagtgctggagcgtatggctttggt
atgggaagtaactataacacaagaggaagaagtgctgaggtggcgataaaaggcaaagag
gttaaacttattcgcaaacgtgaagagtttgaggatttgatagcattagaaaaagagtat
ttggacaattaa
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