KEGG   Sulfurimonas denitrificans: Suden_0948
Entry
Suden_0948        CDS       T00298                                 
Name
(GenBank) Type I site-specific deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tdn  Sulfurimonas denitrificans
Brite
KEGG Orthology (KO) [BR:tdn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tdn02048]
    Suden_0948
Enzymes [BR:tdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Suden_0948
Prokaryotic defense system [BR:tdn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Suden_0948
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII T1RH-like_C DUF3849 Sulf_coat_C
Other DBs
NCBI-ProteinID: ABB44226
UniProt: Q30S05
LinkDB
Position
988657..991749
AA seq 1030 aa
MNDNITLEQVIQQNCINLLSHKEFGYKFITKEDNLIFRENKTSTVLLKKMLIERLYALNS
YEYKGQNYKFSANNIAKAVEDLDVSLNEGLIVANEKITNHLLLGTSYEENLDDGTKKSFS
FRYIDFENIENNHFFVTEEFIVDRANQNEITKTRRPDLMVFVNGIPLVVIELKKSSLNYE
NGIKQLEKEQKKDEIPHLFKYIQLTIAANSNEARYGTMGTPLKFYSLWKEEESEKAKTTL
KTMIQNREVTSLDLTLFALLSKDRLLRLIRHYILFDKKVKKVSRYQQFFGIEKTLKRVEK
ITDGIRAGGLIWHTQGSGKSLTMVMLTKLLKLTYTNAKIIVVTDRVDLDEQIHKTFENTD
IKAGRASSGSDLIEKLQSGISVITTLVHKFEKVRNSKTVINDNNVFVLVDESHRTQGGDL
HNAMKKALPLACYLGFTGTPLLKKEKNKNSFLKFGGEIHRYTIDDAVKDGAVLPLLYEGR
LVDQEVLSPDGLVRKFNMIARELSDDAKRDLQHKWARFQKVASSEQRLELIALDINEHFK
KTLKMSNSGFKAMFATSSKYEAIKYHEIFEEYGDIRTAYVISSNEHEELDGGNKEYVAKA
WQETIKNYGSEEEYLKYVKNEFIHGDEIDLLIVVDKLLTGFDAPRASTLYIDKQLKEHNL
LQAIARVNRLYDGKDYGYIVDYRGLLGELDQALTNYASLDGFDPEDLTGAVVDVRSEIAK
AKTYYTHLEDLFSDVKFKDDLESYVVVLADIQKRDDFKEWLSHFSRAFKLGLSSEKIDDI
LSENEIKLYKKKIKFYNELRKVVQLRYHETCDFGKYEEQMQKLLDTFVSAKEVNELTKLV
NIFETEFEEEVQRVEGKSAKADTILSAVSAVVKEKMESNPAFYKSIAQQIEDVINEYNAK
RLSEEEKLAKAKQLKDLMTGMSKPNEDKYPKEFENKKTLLAIYDNLGDILGNLEVVDFEL
IVKNLTLKFDEIYSGASKKPEWHKNKDVENEITSAMEDVLWDIEDEYDISIENKEKIYQT
IRGIGISFYA
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgaatgataacattacacttgaacaagtaatacaacaaaactgtatcaatcttttaagc
cataaagagtttggatataagtttataaccaaagaagataatcttatttttagagaaaat
aaaacctccaccgtgcttttaaaaaagatgcttatagagagactttatgccttaaatagc
tatgagtacaaagggcaaaactataagtttagtgctaataatatagccaaagcagttgaa
gacttggatgtatctttaaatgagggattaatagtagcaaatgagaaaatcaccaatcat
ctacttttaggtactagttacgaagagaaccttgatgatggcactaaaaaaagtttctct
tttagatacatcgactttgaaaacattgaaaataaccacttttttgtaacagaagagttt
atagtggatcgtgctaaccaaaacgaaattacaaaaactagaagacctgatttgatggtg
tttgtaaatggcatcccactagtggtaattgagctaaaaaaatcaagtctaaattatgaa
aatggtatcaagcagcttgaaaaagagcaaaaaaaagatgaaataccgcatctgtttaaa
tatatccaactaactattgcagcaaatagtaatgaagctagatatggaaccatgggaaca
cctttaaagttttatagcttgtggaaagaggaagagagcgaaaaggcaaaaacaactcta
aaaacgatgatacaaaatagagaagtaactagtctggaccttactttatttgcgctttta
tcgaaagataggctgttaagacttataagacactatattttatttgataaaaaagtaaaa
aaagtgagccgttatcaacagttctttggaattgaaaagacacttaaaagagtagaaaag
ataacagatggtataagagctggtggacttatctggcatactcaaggaagtggtaaatct
ctgacaatggtaatgcttacaaaacttctaaaattaacttacactaatgcaaaaatcata
gtagtaaccgatagagttgatttggatgagcagattcataaaacttttgaaaatactgac
atcaaagcaggaagagcaagtagtggaagtgatttgatagaaaaacttcaaagcggtata
agtgtgattacaacacttgtacataagtttgaaaaggtaagaaactcaaaaactgttatc
aatgataacaatgtattcgtgctagtagatgagtctcaccgtactcaaggtggagatttg
cacaatgctatgaaaaaagctctacctcttgcttgttatcttggatttacaggaacacca
cttcttaaaaaagagaaaaataaaaacagttttttaaagtttggtggtgaaatacataga
tataccatagatgacgctgtaaaagatggagcagttttaccattgctctatgaaggaagg
cttgtagatcaagaggtacttagtccggatggattggtgcgaaagttcaacatgatcgca
agagagttaagtgatgatgcaaaaagagatttgcagcacaaatgggcgaggtttcaaaaa
gttgcatcaagtgagcaaagacttgaactaatagcactagatattaatgagcacttcaaa
aaaactttaaaaatgtcaaatagtggatttaaagcgatgtttgcgacaagtagcaagtat
gaagctataaaatatcatgagatttttgaagagtatggagatatacgaactgcttatgta
atttcaagcaatgaacatgaagaactagatggtggaaataaagaatatgtggcaaaagca
tggcaagagactatcaaaaactatggaagtgaagaagaatatctaaaatatgtaaaaaat
gaatttattcatggtgatgagatagatttactgattgttgtagataagcttttaactggt
tttgatgccccaagagcaagtacgctttatatagataaacaactaaaagaacataacctt
ttacaagcaattgcaagggtaaatagactttatgatggaaaagattatgggtatattgtt
gattatagagggcttctaggagaactagaccaggctttgacaaattatgcttcacttgat
ggctttgatccagaggatttgacgggagctgtagtagatgtaagaagtgaaatagcaaaa
gctaaaacttattacacccatttagaagacctttttagtgatgttaaattcaaagatgat
ttagaaagttatgtagttgtattagcagatattcaaaaaagagatgattttaaagagtgg
ttatcacacttctctcgtgcttttaaattaggactttctagtgaaaaaatcgatgacatt
ttaagtgagaatgaaatcaagctatacaagaaaaaaatcaaattttacaatgaactcaga
aaagtagtgcagctacgatatcacgaaacttgtgattttggaaaatatgaagagcagatg
caaaagctacttgacacctttgtaagtgccaaagaggtgaatgagcttacaaagcttgta
aatatctttgaaacagagtttgaagaagaggtgcaaagggttgagggtaaaagtgcaaaa
gcagacacaattttgagtgctgtaagtgctgttgtaaaagaaaaaatggaatcaaatcca
gcattttataagtcaattgcccagcaaatagaagatgtaatcaatgaatataacgctaaa
agactaagcgaagaggaaaaattagcaaaagcaaaacaattaaaagacttaatgacaggt
atgtccaaaccaaatgaagacaaatatccaaaagagtttgaaaataaaaaaactctacta
gctatatatgataatttaggtgacattttgggtaacttagaagttgttgattttgaactg
attgttaaaaatttgactttgaaatttgatgaaatttattcaggagcttctaaaaaacct
gaatggcataaaaataaagatgttgaaaatgaaataacaagtgcaatggaagatgttctt
tgggatatagaggatgaatatgatatatcaatcgaaaacaaagaaaaaatttatcaaact
attagaggtatagggataagtttttatgcttga

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