Sulfurimonas denitrificans: Suden_1105
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Entry
Suden_1105 CDS
T00298
Name
(GenBank) sigma 28 (Flagella/Sporulation)
KO
K03086
RNA polymerase primary sigma factor
Organism
tdn
Sulfurimonas denitrificans
Pathway
tdn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tdn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Suden_1105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdn03021
]
Suden_1105
Transcription machinery [BR:
tdn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Suden_1105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
ABB44383
UniProt:
Q30RJ8
LinkDB
All DBs
Position
1161640..1163511
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AA seq
623 aa
AA seq
DB search
MTAKELNKAIETFFANQKPKECSTYESLIELFDKQPTAAQAANIFKLIQKHKACIYTSSE
HAKLLNDKEAEARRSAQRKMIENNETDSFDILKEHELLEWSRSDSPVRMYLREMGQIPLL
TKEEEIEISKKIEGGESIIIDAICSVPYLIDFILDYREPLINRERRVKELFKSFEDEKDE
SDDSEDSDDDVEDSDEENVVEKTLTAKDKSRVEKVTISFKALEKAKKEWIKLAEKLAENT
DAELTADLVMHYLSATYKKGVLKERLLDLGPTSKLINELVKAMETALKSDEGYDKELKRL
EYKLPLFNATLKANHRILVDKICDLTKEDIATMVPEATMVSTYMEIKKLVQTKEASKNSF
DMDPEKLADILEQIKRGKNISEISKTKMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIG
LMKAVDKFEYQKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKIMRKHL
QEHGKEPDVEVIALEVGLSVEKVKNVIKITKEPISLEAPIGSEDDGRFGDFIEDKTSLSP
SDAILKDDLRVQIESVLEQLNEREKAVIKLRFGIMDDESDRTLEEIGKELNVTRERVRQI
ESSAIKKLKHPKVGRKLKNYIEE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaagaactcaacaaggctattgaaacatttttcgccaatcaaaagccaaaa
gagtgttccacttacgaatcacttatagaactttttgacaaacaaccaacagctgcacaa
gctgcaaatatttttaaactaatacagaagcataaagcttgcatatatacatcatcagaa
catgcgaaattgcttaatgacaaagaagcagaagctagaagaagtgctcaaagaaagatg
attgagaataacgagacagacagctttgacatattaaaagagcatgaactgcttgagtgg
tcaagatctgattcgcctgttcgtatgtatcttcgtgaaatgggtcaaattccactgctt
acaaaagaagaagagattgagataagtaagaaaatagaaggcggagagagtattatcatt
gatgcaatctgttctgttccatacctaatagattttatacttgactatagagagcctctg
ataaacagagaaagaagagttaaagagctttttaagagctttgaagatgaaaaagacgag
agtgatgatagtgaagatagcgatgatgatgtagaagatagtgatgaagaaaatgtagtt
gaaaaaacattaactgctaaagataaaagtagagtagaaaaagtaactataagctttaaa
gctttagaaaaagctaaaaaagagtggataaaacttgctgaaaaattagctgaaaatact
gatgctgaactcacagctgatctcgtcatgcattatctaagcgctacttataaaaaaggg
gttttaaaagagaggctattagatctaggacctacttcaaagctcataaatgagcttgta
aaagctatggagaccgcactaaagagtgatgaaggttatgataaagagttaaaaagatta
gagtataaactacctcttttcaatgcaacacttaaagcaaatcatagaatactagttgat
aagatttgtgatttaacaaaagaggatatagctactatggtgcctgaagccaccatggtt
agcacatacatggagattaagaagttagttcaaacaaaagaggcttcaaaaaatagcttt
gatatggatccagaaaagttagcagatattttagaacagattaaacgcggtaaaaatatc
tctgaaatctccaaaacaaaaatggctaaatcaaaccttagacttgttgtatctattgct
aagcgctacacaaatcgaggattacctttccttgatcttattcaagagggaaatataggg
cttatgaaagctgttgacaagtttgagtatcaaaaaggttacaaattctcaacttatgct
acatggtggattcgccaagcaatctctcgcgcaattgcagatcaagcaagaactattcgt
atccctattcacatgatagagactataaatcgtattaacaagattatgcgtaaacacctt
caagaacatggtaaagagccagatgttgaagtaattgcactagaagttggtctctcagtt
gaaaaagttaaaaatgtaattaaaatcacaaaagagcctataagtcttgaagcacctatt
ggaagtgaagatgatgggcgctttggcgattttattgaagataaaacatcgctatctcct
tctgatgctatcttaaaagatgacttaagagttcaaattgagagtgttttagagcagcta
aatgagagagagaaagcggttatcaagcttcgctttggaattatggatgatgagtctgat
agaacattagaagagattggaaaagagctcaatgtaactcgtgagagagttcgtcaaatc
gagtcaagtgcaatcaaaaaattaaaacatcctaaagttggaagaaaacttaaaaattat
atagaagagtag
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