Sulfurimonas denitrificans: Suden_1146
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Entry
Suden_1146 CDS
T00298
Name
(GenBank) Superfamily II DNA and RNA helicases-like protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tdn
Sulfurimonas denitrificans
Pathway
tdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Suden_1146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdn03019
]
Suden_1146
Enzymes [BR:
tdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Suden_1146
Messenger RNA biogenesis [BR:
tdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Suden_1146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
Utp25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ABB44424
UniProt:
Q30RF7
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All DBs
Position
1202556..1203203
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AA seq
215 aa
AA seq
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MSEKSIKTTKKYYDYVSVGNRTAQMAYFVQQHDKNRMFEELLKTLQNMQIIVLVKSKRNA
DEIMRYLNTKEIKSISVHGNHRVAQIEDAQKSFNSKETKILITTDRILEKLTPMEVHVVV
NYDLPLEASDYFKALLLVDEIGQSISLIDPEDEGMLATIELMMKCEMAEVEMKHFEHTAR
ETTTPKERINKPRHKKVEQRAKKKAEIKSKWVPSK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaaagcattaaaacaactaaaaaatattatgactatgtgagtgttggtaac
cgaactgcgcaaatggcatattttgtacaacaacatgacaaaaacagaatgtttgaagag
ttactaaaaactctacaaaacatgcaaattattgttcttgtaaagagtaagcgaaatgct
gatgagatcatgagatatctaaataccaaagaaatcaaatctatatcagttcatggaaac
cacagagttgctcaaatagaagatgcacaaaaatcgtttaattctaaagagacaaaaata
ttaataactacagatagaatcttggaaaaactaacacctatggaagtacatgtagttgta
aattatgaccttccactagaggcatctgattactttaaagctctgcttttagttgatgaa
attggtcaatcaatatcactaatagacccagaagatgagggaatgctagctacaattgag
ctaatgatgaagtgtgaaatggctgaagttgagatgaaacattttgagcatacagcccgt
gaaacaacaactccaaaagagagaataaacaaacctcgtcacaaaaaagtagagcaacga
gcaaagaaaaaggctgaaataaagtctaaatgggtgccaagcaaataa
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