Candidatus Thiocaldithrix dubininis: QJT80_00430
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Entry
QJT80_00430 CDS
T09759
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00300
Lysine biosynthesis
tdu00470
D-Amino acid metabolism
tdu01100
Metabolic pathways
tdu01110
Biosynthesis of secondary metabolites
tdu01120
Microbial metabolism in diverse environments
tdu01230
Biosynthesis of amino acids
Module
tdu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QJT80_00430 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QJT80_00430 (dapF)
Enzymes [BR:
tdu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QJT80_00430 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WGZ90951
UniProt:
A0AA95H561
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All DBs
Position
complement(89448..90287)
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AA seq
279 aa
AA seq
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MSGQIIEFSKMQGAGNDFMVIDAIRQTIDLSSAQIQQLANRHFGIGFDQLLMVEQYTGED
ADFRYRIFNSDGSEVEQCGNGARCFARFVYEQGLTQKTTIPVMTKAGRIELRLQADGQVT
VNMGVPQLEPAQIPFKAAQRQTRYELALNEQNIHLSAVSMGNPHAVLRVDEVDIAPVAEW
GAAIETHPQFPQRVNVGFMQVLDSAHIRLRVFERGAGETLACGTGACAAVVAGRLLGILA
ESVSVQLRGGNLQIQWLGEGQPVWMTGPAVTVYRGTISV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaaatcatcgaatttagtaaaatgcagggggcaggcaatgactttatggta
attgatgcgattcgacaaacgattgatttatcatccgcacagattcaacaattagcgaac
cgccattttggtattggctttgatcaactcttaatggttgaacaatacacaggtgaagac
gctgattttcgttatcggatttttaacagcgatggcagcgaggttgagcaatgtggcaat
ggtgcgcgttgttttgcacgctttgtctacgagcaaggcttaacccaaaaaaccacgatt
cccgtaatgaccaaagccgggcgcattgaattacgcttacaagcagatgggcaagtaacg
gttaatatgggagtgccgcaattagaacccgcgcagattccctttaaagcagcgcaacgc
caaactcgctacgaattagcacttaatgaacagaacattcacttgtcagccgtgtcaatg
gggaatcctcatgctgtattaagagttgatgaggtagatatagcgccggtagctgaatgg
ggggcagccattgaaacacacccacagtttccacaacgcgttaatgtaggttttatgcaa
gtgctagactctgcacatattcgcttacgggtttttgagcgcggtgcaggcgaaacctta
gcttgtggaacgggcgcatgtgcagcagtggttgccgggcgtttgttagggattttagca
gaaagcgtatccgtacagttacgtgggggtaatttacagatacaatggttaggtgaaggt
caacctgtttggatgacaggaccagccgttacggtttataggggaacaatcagcgtatga
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