Candidatus Thiocaldithrix dubininis: QJT80_01675
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Entry
QJT80_01675 CDS
T09759
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdu03400
]
QJT80_01675 (radA)
DNA repair and recombination proteins [BR:
tdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QJT80_01675 (radA)
BRITE hierarchy
Motif
Pfam:
ATPase
AAA_25
ChlI
Rubredoxin_2
Lon_C
AAA_16
AAA_22
DnaB_C
AAA
SLFN-g3_helicase
AAA_24
MCM
AAA_14
PAXNEB
NTPase_1
nSTAND3
AAA_5
RecA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WGZ91191
UniProt:
A0AA95H5P2
LinkDB
All DBs
Position
complement(355602..356963)
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AA seq
453 aa
AA seq
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MSKTKVQYYCTACGSVHSKWAGQCSECEAWNTLEESIAVATAKPANTRVGNYSGDKVAIR
SLNEVNLSEDPRIPTQQPELDRVLGGGLVMGSVILIGGDPGIGKSTILLQTLTELTNLRS
LYVTGEESLQQVGLRARRLGLPTTGLRLLTETCVENVITLAQQEQPNLMVIDSIQTIYTD
SLQSAPGSVSQIRESAAKLVRFAKQTQTVLFIVGHVTKEGTLAGPRVLEHMVDTVLYFEG
DPGGRYRILRAVKNRFGAVNELGVFAMTEQGLKGVSNPSAIFLSRHEEPVSGSVIMVTRE
GTRPLMVEVQALVDQSHGNVPRRVTLGLEQNRLAMLLAVMHRHGGISMFDQDVFINVVGG
VKISETAADLPLLLAALSSFRNRPLPADLIVFGEVGLAGEIRPVPNGEERLREAAKHGFT
QAIVPKGNKPRHPIEGMRIVAVTRLEKAIEQLM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaactaaagttcaatattactgtactgcttgtggcagtgtgcatagcaaatgg
gcagggcaatgttctgaatgtgaagcgtggaataccttagaagaaagcattgcagttgct
actgctaaacccgccaatacccgcgtaggcaactattcaggggataaagtagccattcgc
tccctaaatgaggtgaatttgagcgaagatccacgtattcctacccaacaacccgagtta
gatcgggtattaggcggcggattagtcatgggttcagtgattctgataggtggtgacccg
ggtattggtaaatctactatcttattgcaaaccctaacggaattaaccaacttacgtagt
ttatacgtcacgggtgaagaatccctacaacaagttggtttacgcgctagacgcttgggc
ttacctaccacgggtttacgcctgttaaccgaaacctgcgttgaaaatgtcataacactg
gcgcaacaagaacaacccaatttaatggtaattgactccattcagaccatttacaccgat
agcctacaatctgctcccggctcagtgagtcaaatccgcgaatcagccgcaaaattagta
cgctttgctaaacaaacccaaacggttttatttattgttgggcacgtgacaaaagaaggc
acattggcaggaccacgtgtgctagaacacatggtcgatacagttttatactttgagggt
gatccgggcggtcgttatcgcattttacgtgcggttaaaaatcgctttggtgcggtaaat
gaactgggtgtgttcgctatgaccgaacaaggtctcaaaggcgtaagtaatccatcggcg
atttttttatcacgccatgaagaaccagtttcgggcagtgtaattatggtcacccgcgaa
ggcacgcgcccgttaatggttgaagttcaagcattagttgatcaaagccatggcaatgtg
ccgcgccgcgtcaccttaggcttggaacaaaatcgtttggctatgttgttagcggtaatg
catcgacacggcggtatttctatgtttgatcaagatgtttttatcaatgtagtcggtggc
gttaagatttcagaaaccgccgctgatttaccattactacttgcggctttatccagtttc
cgcaatcgtcctctgcctgctgatctaattgtatttggagaggttggacttgctggtgaa
attcgcccagtaccaaacggggaggaacgattacgcgaagccgctaaacatggttttaca
caagccatcgtaccgaaaggcaataaaccgcgtcaccccattgagggtatgcgaattgta
gcggtgactcgactggaaaaagcgattgaacaactgatgtaa
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