Candidatus Thiocaldithrix dubininis: QJT80_02695
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Entry
QJT80_02695 CDS
T09759
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdu03021
]
QJT80_02695 (rpoH)
Transcription machinery [BR:
tdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QJT80_02695 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
2Fe-2S_thioredx
GntR
Motif
Other DBs
NCBI-ProteinID:
WGZ91389
UniProt:
A0AA95H9T6
LinkDB
All DBs
Position
555089..555955
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AA seq
288 aa
AA seq
DB search
MTNALVLKGQMLPVPVGNLESYIHAIHAIPVLNADEEKQLAQRLKLQEDLEAARQLILHN
LRFVVKVARGYNGYGLPLGDLVQEGNVGLMKAVKRFDPDMNVRLISFAVHWIRAEIHEFI
LRNWKIVKVATTKAQRKLFFNLRSSKQRLGWLSNEEAKSMADELGVTTAEVYEMEKRLSA
NDVTFDLSPDQDDDEGAFAPSQYLAAESADPAETLEAEEWDAYTRDRFQSALNGLDARSK
DILAQRWLAEEKATLQDLADKYKVSAERIRQLENAAVNKLKAAVLEAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgctttagttctcaaaggccaaatgttgccggttccagttggtaatctggaa
agttacatccatgcgatccatgcgattccggtattaaacgcagacgaagaaaaacaatta
gcccagcgtttaaaattacaggaagacttggaggcagctcggcaattaattctgcataac
ttgcgttttgtagtgaaagtagcgcgtggctataacggttatggcttgcctttaggtgat
ttggtacaagaaggcaatgtgggtttaatgaaagcagtgaaacgctttgacccagatatg
aatgtgcgtttgatttcctttgctgtacattggattcgtgcagaaattcacgagttcatc
ttacgcaactggaaaattgtgaaagtggcgactaccaaagcacaacgcaaattgttcttt
aatttgcgtagtagcaaacagcgcttaggttggttaagtaatgaagaagccaaatcaatg
gcggatgagttaggcgtgaccacagccgaagtctatgaaatggaaaaacgcttaagtgcg
aatgatgtcacgtttgatttgagtccagatcaagacgatgatgaaggcgcatttgctcct
agccagtatttggcagcagaatcggcagacccggctgaaaccttagaagctgaagaatgg
gatgcttatacccgtgatcgtttccaaagcgctttaaacgggctggatgcacgcagtaaa
gatattttggcacaacgttggttagcagaggaaaaagcaactctgcaagacttggcggat
aaatacaaagtatcggctgaacgcattcgtcagttagaaaatgcagcagtgaataaactt
aaagcggctgtattagaagcggcttaa
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