Candidatus Thiocaldithrix dubininis: QJT80_02925
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Entry
QJT80_02925 CDS
T09759
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00061
Fatty acid biosynthesis
tdu00071
Fatty acid degradation
tdu01100
Metabolic pathways
tdu01212
Fatty acid metabolism
tdu02024
Quorum sensing
tdu04146
Peroxisome
Module
tdu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
QJT80_02925
00071 Fatty acid degradation
QJT80_02925
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
QJT80_02925
09145 Cellular community - prokaryotes
02024 Quorum sensing
QJT80_02925
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tdu01004
]
QJT80_02925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdu04147
]
QJT80_02925
Enzymes [BR:
tdu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
QJT80_02925
Lipid biosynthesis proteins [BR:
tdu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
QJT80_02925
Exosome [BR:
tdu04147
]
Exosomal proteins
Exosomal proteins of breast milk
QJT80_02925
Exosomal proteins of breast cancer cells
QJT80_02925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WGZ91434
UniProt:
A0AA95H9W9
LinkDB
All DBs
Position
complement(603053..604723)
Genome browser
AA seq
556 aa
AA seq
DB search
MQKPWLSSYPPYVPAEIDTHQYRSLVDLFQQTVAEFADSPAYSNMGKELSYAQVDQFSKA
LAAYLIRGAGMQPGERIAIMLPNVLQYPIALFAGLRAGLIVVNTNPMYTERELAHQLQDS
GATAIVILDNFAHTLQAILPEVPQLKTIITTGIGDLLGDFKGLLVNVVVKYVKKMVPTYQ
LPTALRFRQALNLGQHYADHFQDANPQHEDIAFLQYTGGTTGVAKGAMLSHRNLIANILQ
ADAWTAKDLINGQEIFITALPLYHVFALTANGFFAVRLGAKNVLITNPRDMPAFLKELQK
HAFTFISGVNTLFNAMLNHPDIHKVNFSALKITLGGGMAVQRAVADKWKQVTGVTLLEAY
GLTETSPAVCINPVDLPEYNGMIGLPLSSTEVSIRDINGDALDFEQAGELWVKGPQVMQG
YWQRPDETAKVMRPEGWLRTGDIALMNSQGYVKLVDRLKDMVLVSGFNVYPNEIEDILAL
HPKILEAGVIGIKDDYSGEVVKAFIVKKDPSLTEEEVRDYCRRELSAYKCPKQIVFVDNL
PKSNVGKILRKELRNL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaccatggctttccagttatccgccttatgtacctgcggaaattgatacccat
cagtaccgttcccttgtggatttatttcaacaaaccgtggctgaatttgccgatagtccc
gcttatagcaatatgggcaaggagctaagttatgcgcaagttgatcaattcagcaaagcc
ttagccgcttatttaattcgcggtgcaggtatgcagcccggcgaacgtattgccatcatg
ctacccaatgtcttgcaatatccgattgccttatttgcgggtttgcgagcgggtttaatc
gtggtgaataccaatccgatgtatactgagcgtgaattggcgcatcaattacaagattca
ggcgcaaccgccattgttatcttggataattttgcgcacaccttacaagccattctgcca
gaagtccctcagcttaaaacgattatcaccacgggtattggtgatttactcggggacttt
aaaggcttgttggtaaacgttgtcgttaaatacgtcaaaaagatggtacccacttatcag
ttacccactgccttacgctttcgccaagctttaaatttagggcagcattacgcggatcat
tttcaagacgcaaacccacaacacgaagatatagcctttctacaatacacgggcggtaca
actggcgtagcaaaaggcgcaatgctaagccaccgcaatctaattgctaatattttgcaa
gctgatgcgtggactgctaaagatttaatcaacggacaagaaatcttcattactgccttg
ccgctgtatcatgtgtttgcattaacggcgaatggcttctttgcggttagattaggtgca
aaaaacgtgctgattaccaatccacgcgatatgcctgcttttttaaaggaactgcaaaag
catgctttcacctttatcagtggtgtgaataccttattcaatgccatgctgaatcatccc
gatattcacaaggttaatttttccgctttgaaaattaccttaggcggcggtatggcggta
caacgtgccgtcgcagataagtggaaacaagtgaccggcgttacgctactagaggcatat
ggtttaaccgaaacttcgccagccgtgtgtattaatcccgtcgatttacccgagtataac
ggcatgattggcttgcctttatcctccacagaagtttctattcgggatatcaacggcgat
gccttggattttgaacaagcaggtgaattgtgggtaaaaggcccgcaagttatgcaaggc
tattggcaacgccccgatgaaaccgccaaagtcatgcgcccggaaggttggttacgcaca
ggcgatatagccctcatgaatagtcaaggttatgtcaaactggtcgaccgcttaaaagat
atggtgctcgtttcgggctttaatgtgtatccgaatgaaatcgaagacatattagcactg
catcctaaaattctcgaagcgggtgtcatcggtattaaagatgactattcgggtgaggtg
gttaaagcctttattgtgaaaaaagaccccagtctaaccgaagaagaagtacgcgattat
tgtcggcgcgaattatccgcttacaaatgcccaaaacaaattgtgtttgtagacaatttg
ccaaaaagcaatgtaggtaaaattctgcgtaaggaattgcgcaacttatag
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