Candidatus Thiocaldithrix dubininis: QJT80_03725
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Entry
QJT80_03725 CDS
T09759
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QJT80_03725 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdu03400
]
QJT80_03725 (recC)
Enzymes [BR:
tdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QJT80_03725 (recC)
DNA repair and recombination proteins [BR:
tdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QJT80_03725 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WGZ91589
UniProt:
A0AA95KFB4
LinkDB
All DBs
Position
complement(775642..778797)
Genome browser
AA seq
1051 aa
AA seq
DB search
MLYLHQSNQLERLAHHFAALQRIDPLPPFQDEVVVVQNSGMGRWLSLQAAKVNGIAANAR
YLFPAEIMWEMLRAVLENVPERDPGAAPLLRWRLFKEFVNAPEQWTELSSYLATGIDGAW
QLANQIAKVFDAYLFFRPEWIREWEDNEGSGVDWQARLWWQMMGAPNLTHWVRLQNQFKA
QLALHRDKLPKRICYFSVPILSPGYVELLGEIAQYIDIHIYLMNPSEEYWSDIVSEKRKY
KRELAEQEHVEVGNPLLASWGRQGQDFMDLLLNANASDDETSLFVSEAENSLLKYIQADI
LHLRMPSPHTFPLTDDSIRIHSCHSPMREVEVLYDQLLALFECQPDLTPADVVVMTPDID
KYAPYLEAVFANAEYPLPFSIADSHAGKAQSLLNLCEQLLALPQGRCEVESILAVLEFEE
VRTHLGMDENQTLQCREWIRAANIRWGVDSEARAQLGGAATPEHTWRYGLDRLLLGYMLP
GDDLFADVLPYEHIEGSQAEVLGELLQVLDVLLAMSQWQYESLSLADWRARLTAVLVCLV
GETAALQPIWAAFDKLKLALQHAAFDELLAWPVLQNALSEHLEQRSESDGFLGRGITFCA
LMPMRTVPFRFVAIIGMNDGIFPRRDVYASFNRMAYSIHKGDRIKRNEDRYLFLESLLSA
RQWFYLSYVGQSLHDNAVLPPSVLVSELQDYIARIHPDFSRQHFIQHRLQAFSKPYLQAD
APFFTYSAHLAETQNTQYYCPVEFWQNNVLPEPEQPSRKVNLQQLIRFFQQPARLFLNER
FQLKLGEQNYELPNREPFDLARFQDGEIRGRIYQALIRDKSPTQVLSLLRAEGHLPHGEL
GDLLFKQELQNTERFYQQYGAPPSQGRKQAFHLALEDFELVGELDKIVNQQRVLYELNYL
SYWQWLDIWLKHLVLSALGHESTIIYGIEKDEDRQFTLAGYQLAPYADALNQLQQLLQLY
WQGLQAPLPFFPKTGFNLASRKKEQTVEKVMSTWEGKGQFKGEKNQAEYVLFYHDTNPLI
DFKQDFTALTTTIYQPLMTCRSALANKKSES
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctacaccaatccaatcagttagaacgtcttgcccatcactttgcggctttg
caacgtattgatcctttgccgcccttccaagatgaagtcgtggtggtgcaaaacagtggt
atggggcgttggctgtcattacaagcggctaaggtcaatggtattgctgcaaacgcccgt
tatttatttcctgcggaaattatgtgggagatgttgcgggcagtattggaaaacgtgcca
gagcgtgacccgggtgcagcgccgttattacgctggcgtttattcaaagaatttgtgaac
gcgccggaacagtggacagaattaagttcttatttagccaccggaattgacggtgcatgg
cagttagctaatcaaatcgccaaagtatttgatgcatatctattctttcgccccgaatgg
atacgtgaatgggaagacaacgagggttcgggcgtggattggcaagcacggctgtggtgg
caaatgatgggtgcgcctaatttaacgcattgggtacgattacagaatcagttcaaggca
caattagcgttacaccgagacaagctacctaaacgtatctgctatttctctgtacctatt
ctgtcgcccggttatgtcgaattattaggtgaaattgcacaatacattgatattcatatt
tacttgatgaatccgtcagaagagtattggagcgacattgtttcggaaaaacgtaaatat
aaacgcgaattagccgagcaagagcatgtagaagtgggtaatcctttactcgcgtcgtgg
gggcggcaagggcaggattttatggatttgctattaaatgccaatgccagcgatgacgaa
accagcttgtttgtcagtgaagcagaaaacagcttattgaaatacattcaagccgatatt
ttacatctgcgcatgcccagtccacacacgtttccgttgactgatgattcgattcgtatt
catagctgccattcgccaatgcgtgaagtagaagtattatacgatcagttattagcctta
tttgaatgtcagccagatttaacccccgccgatgtggtggttatgaccccggatattgat
aagtatgcgccgtatttagaagccgtctttgccaatgccgaatatccactaccgtttagt
attgcggatagccacgcgggcaaggcgcaaagcttattaaatctctgcgagcaactatta
gccttaccccaagggcgttgtgaggtagaaagcattttagcggtgctcgaatttgaggaa
gtgcgtacacatttaggtatggatgaaaaccaaaccttacaatgtcgtgaatggattcgt
gccgccaatattcgctggggggtggatagcgaagcacgtgcgcaattggggggcgcggca
acgcctgaacatacatggcgctacggtttagatcgcttattgttgggttatatgttaccc
ggcgatgatttatttgcggatgtattgccttatgaacatattgaaggcagccaagcagag
gtcttaggcgaactgttacaagtcttagatgtgttattggcaatgagccaatggcaatac
gaaagcttaagcttagccgattggcgcgcacgtctcactgccgttttagtatgtttagtg
ggtgaaaccgctgctttacaaccgatttgggcggcttttgataaactaaaacttgcctta
caacacgcggcatttgatgagttattagcttggccggtgttacaaaatgcgctaagtgaa
catttggaacaacgcagtgagtctgatggctttttgggacgtggtattaccttttgtgcc
ttaatgcccatgcgtactgtgccgtttcgctttgtggcaatcattggcatgaatgatggt
atttttccgcgccgtgatgtgtatgccagttttaaccgtatggcgtatagcattcacaaa
ggcgaccgtattaaacgtaatgaagaccgttacttatttttagaaagcttgctatctgcc
cgccagtggttttatttgagctatgtggggcaaagtttacacgataatgcggttttacca
ccgtccgtattagtgtcagaactgcaagattatattgcgcggatacatccagacttcagc
cgacagcattttattcagcaccgcttacaagcctttagtaaaccttatttacaagcggat
gcaccgtttttcacctacagtgcgcatttagccgaaacacaaaatacacagtattattgc
ccggttgaattttggcaaaacaacgttttacctgaacccgaacaacccagccgtaaagtc
aatttacagcagcttattcgcttttttcaacaacctgcccgcttgtttttaaatgagcgc
tttcaattaaaattaggtgaacagaattatgagctacccaatcgtgaaccttttgattta
gctcgtttccaagacggtgaaattcgggggcgcatttatcaagccttgattcgtgataaa
tccccgacgcaagtactgagtttattacgtgctgaagggcatttaccgcatggtgaatta
ggcgacttattatttaaacaagaattgcaaaatactgaacggttttaccagcaatacggt
gcgcccccctctcaaggtagaaaacaagcatttcacttggcattagaagattttgagtta
gtgggtgaattggacaaaatagtcaaccagcaacgcgttttatacgaattaaattactta
agttattggcaatggttggatatttggcttaaacatttggtattaagtgcgctggggcat
gaaagcactattatttatggcattgaaaaagacgaagatcgacaatttaccttagccggt
taccaacttgcaccctacgctgatgcgctgaatcagctccagcaactcttacaactttat
tggcaaggtttacaagccccactaccgttttttcctaaaactggatttaacttggcttcc
cgcaaaaaagaacaaaccgttgagaaagtgatgagtacttgggaaggtaaagggcaattt
aaaggcgaaaagaaccaagccgagtatgtgctattttatcatgacaccaacccattgata
gatttcaaacaagactttacggcactcacgaccacaatttatcaacccctgatgacttgc
cgtagtgcattggcaaataaaaagtctgaatcatga
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