Candidatus Thiocaldithrix dubininis: QJT80_03850
Help
Entry
QJT80_03850 CDS
T09759
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QJT80_03850
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tdu01007
]
QJT80_03850
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdu03016
]
QJT80_03850
Enzymes [BR:
tdu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
QJT80_03850
Amino acid related enzymes [BR:
tdu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
QJT80_03850
Transfer RNA biogenesis [BR:
tdu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
QJT80_03850
Prokaryotic type
QJT80_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
WGZ91610
UniProt:
A0AA95H7D7
LinkDB
All DBs
Position
complement(800800..802509)
Genome browser
AA seq
569 aa
AA seq
DB search
MRVSKFPISTLRETPADAEIISHQLMLRAGLIRRLASGLYTWMPYGLRVLRKVEAIVREE
MNQAGAVEVLMPSVQPAELWQESGRWEKYGAELLRLKDRHQRDFCYGPTHEEIITDYARK
ELNSYKQLPVNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHLTQESLQATYDTMYTA
YSRIFQRLGLDFRAVQADTGSIGGNASHEFHVLADSGEDAIAFASGSHYAANIELAEAVS
LIAERAAPTQALQEVDTPNAKTIEELVAQFNVPIEKTVKTLIVEASDAVEADFVALLVRG
DHSLNEIKAEKLVEVAEPLRFAREDEIRALIGAGPGSLGPIGLTIPVIADRTVANMSDFS
AGANSDGKHYFGINWQRDVANPQVADIRNVVVGDPSPDGQGTLAIVRGIEVGHIFQLGKK
YSEALNATVLDESGRAQVMTMGCYGIGVSRVVAAAIEQHNDEFGIRWPSAIAPFQVVLAP
LNMQKSPEVAAKAEELYAQLQATGVDVLLDDRALRPGAMFADHELLGIPHRIVISERGLQ
AGELEYKARSGGDAVKVPVNEVLSFVKAL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtatccaaattccctatttcgacgctgcgcgaaacgcctgccgatgccgaaatt
atcagccaccaacttatgttacgcgccggtttaattcgccgccttgcttctggtttatat
acgtggatgccgtatggcttacgtgtcttacgtaaagtagaagctattgtccgtgaagaa
atgaatcaagcaggcgcagtcgaagtactaatgccttcggtacaacccgcagagttatgg
caagaatcagggcgttgggaaaaatacggcgcggaattattacgcttaaaagaccgtcat
caacgtgatttttgttatggacctacgcatgaagaaatcattaccgattatgcgcgtaaa
gaattaaatagttacaaacaattgcccgtcaatttctatcaaattcaaaccaaattccgt
gacgaagtacgcccccgctttggcgtcatgcgagcgcgtgaatttttaatgaaagatgcg
tattcattccatttaacccaagaatcgttgcaagccacttacgacaccatgtacaccgcc
tattcacgtattttccaacgattaggtttggatttccgcgccgtacaagcggataccggt
tcaattgggggtaatgcttcgcacgaattccacgttttagcggattccggcgaagatgcg
attgcctttgccagtggtagccattacgcagcgaatattgaattggctgaagcggtttcg
ttaattgctgagcgcgctgcacccacacaagcgttacaggaagttgatacgccgaatgcc
aaaaccattgaagaattggtcgcgcaatttaatgtgccgattgaaaaaaccgttaaaacc
ttaatcgttgaagcatctgatgcagtcgaagccgattttgtcgccttattagtgcgcggt
gatcacagtttaaatgaaattaaagctgaaaaattagtggaagtggctgaaccgctacgt
tttgcgcgggaagatgaaattcgggcgctcattggcgcaggaccgggttcattaggccca
atcggtttaacgattcctgtcattgcagatcggacggtagcgaatatgtctgattttagt
gcgggtgcaaatagcgacggtaagcattactttggtattaactggcaacgcgatgtggct
aatccacaagtggcggatattcgcaatgttgttgttggcgaccccagcccagacggtcaa
ggcacattggcgattgtgcgtgggattgaagttgggcatattttccaattgggcaagaaa
tattcagaagccctgaatgccacggtattagacgaaagcggacgtgcgcaagtcatgacc
atgggttgttatggaattggggtatctcgcgtcgtggcggcggcgattgagcagcataat
gacgaatttggtatccgctggccgagcgcgattgcacctttccaagtggtacttgcgcct
ttgaatatgcaaaagtcacccgaagttgccgccaaagcggaagaactgtatgcacaattg
caagcaactggggttgatgtattgttggatgatcgtgccttacgtcccggtgctatgttt
gctgaccatgagttattgggcattccacaccgtattgtgatctctgaacggggtttacaa
gcaggtgaattggaatataaagcgcgcagtggcggtgatgcggtaaaagtaccggtcaat
gaagtgctaagctttgtaaaagcgctataa
DBGET
integrated database retrieval system
