Candidatus Thiocaldithrix dubininis: QJT80_04560
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Entry
QJT80_04560 CDS
T09759
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QJT80_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdu03400
]
QJT80_04560
Enzymes [BR:
tdu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QJT80_04560
DNA repair and recombination proteins [BR:
tdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QJT80_04560
Prokaryotic type
QJT80_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGZ91750
UniProt:
A0AA95H9A9
LinkDB
All DBs
Position
975752..976381
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AA seq
209 aa
AA seq
DB search
MMFSIHPYQPLVEHQQLLRQCRACAAMIPPVIVGEPVLTPILSLGQAPGIHEGEIGRPFG
WTAGRTLFKWFESIGVDEATYRHNVYMCAVCRCFPGRNHKGGDRVPDRQEIANCAHWLQT
EIGLLQPQLIILIGKLAIQQFLPVSKLDAVVGRLHTVLLNEREVQLAPLPHPSGLSTWFR
TEPGKTLLNQSLIAIQAHPAWQNLMKANK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttagtattcatccttatcaacctttggttgaacatcaacagttgttacgccaa
tgtcgggcatgcgccgctatgattccgccagtgattgtgggcgagcctgtattaacgccg
attttgtcacttggacaagcaccgggtattcatgaaggcgagatagggcggccgtttggt
tggacggctggacgaactttgtttaagtggtttgaatccattggcgtagacgaagcaacc
tatcggcacaatgtgtatatgtgtgcggtgtgccgctgttttccggggcgcaatcataaa
ggcggggatcgtgtgcctgataggcaagaaattgccaattgcgcccattggttacaaact
gaaataggcttattacaacctcaactgattattttgattggcaaattggctattcagcaa
tttttacccgtgtctaagctagatgcagtagtaggacgtttacatactgtgctgctaaat
gaacgtgaagtacaacttgcccctttgccgcatccatccggcttatccacttggtttcgt
actgaaccgggtaaaaccttattaaatcaatcgttaatagcgattcaagcgcatccggca
tggcaaaacttaatgaaagctaataaataa
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