Candidatus Thiocaldithrix dubininis: QJT80_05045
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Entry
QJT80_05045 CDS
T09759
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdu03019
]
QJT80_05045 (rapZ)
Messenger RNA biogenesis [BR:
tdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QJT80_05045 (rapZ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
SKI
AAA_28
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WGZ91847
UniProt:
A0AA95KL86
LinkDB
All DBs
Position
complement(1064738..1065604)
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AA seq
288 aa
AA seq
DB search
MQQIIIVTGMSGAGKTYALHTLEDNGYYCIDNLPATLLEALLGTAQIAKQPYLAIGIDIR
GGRESLNAIPATIERIRQRVNNTQLVYLYAKPDVLFKRYNETRRLHPLTLETPELDKAIA
LETEILMPLAAEADLRIDTSHTSVYELGRLLKARICQTTPHDLSLMIQSFGFKHAAPSDS
DYLFDVRCLPNPYWIPELRQLTGQDRAIVDWLESHQTVNDMASDIQSFVQRWLPSPHGEC
QRAYLTVSIGCTGGRHRSVYIAERLYQHFKTQPGIKAVLRHREMNYIR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaattattattgtaacgggtatgtccggtgcagggaaaacctacgctttacac
actttagaagataacggttattattgcattgataacctacctgccaccttgctcgaagcc
ttgttaggtacagcacaaattgccaaacaaccgtacttagccatcggtattgatattcgg
ggtgggcgtgaaagcttgaatgctattcccgcaacgatagaacggattcgccaacgcgtt
aataatactcagttggtttatttgtacgccaagccagatgttttatttaaacgttataat
gaaactcgccgtttacatccactaaccttagaaacgcccgaattagacaaagccattgca
ttagaaacggaaattctcatgccgcttgcggcagaagcagatttacggattgatacttcg
cataccagtgtttacgaattggggcgcttacttaaagcccgtatttgccaaaccaccccg
cacgatttgtcattaatgattcaatcgtttggttttaaacacgccgccccctctgattct
gattacttatttgatgtgcgctgcttacccaatccgtattggatacctgaattaagacag
cttaccgggcaagatcgtgcgattgttgattggttggaatcgcatcaaaccgtcaatgat
atggcatcagatattcaaagtttcgtacaacgttggttacccagcccacacggtgaatgt
caacgcgcttatctaaccgtctcaattggttgcacgggtgggcgtcatcgttcggtttat
attgctgagcgtttatatcagcattttaaaacccaaccgggcattaaagccgttttacgc
caccgcgaaatgaactacattcgttaa
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