Candidatus Thiocaldithrix dubininis: QJT80_05095
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Entry
QJT80_05095 CDS
T09759
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QJT80_05095 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdu03019
]
QJT80_05095 (groL)
03110 Chaperones and folding catalysts [BR:
tdu03110
]
QJT80_05095 (groL)
03029 Mitochondrial biogenesis [BR:
tdu03029
]
QJT80_05095 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdu04147
]
QJT80_05095 (groL)
Enzymes [BR:
tdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
QJT80_05095 (groL)
Messenger RNA biogenesis [BR:
tdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QJT80_05095 (groL)
Chaperones and folding catalysts [BR:
tdu03110
]
Heat shock proteins
HSP60 / Chaperonin
QJT80_05095 (groL)
Mitochondrial biogenesis [BR:
tdu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
QJT80_05095 (groL)
Exosome [BR:
tdu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QJT80_05095 (groL)
Exosomal proteins of other body fluids (saliva and urine)
QJT80_05095 (groL)
Exosomal proteins of breast cancer cells
QJT80_05095 (groL)
Exosomal proteins of colorectal cancer cells
QJT80_05095 (groL)
Exosomal proteins of bladder cancer cells
QJT80_05095 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WGZ91856
UniProt:
A0AA95HBU8
LinkDB
All DBs
Position
1072214..1073851
Genome browser
AA seq
545 aa
AA seq
DB search
MSAKEVRFGDDARSRMVKGINVLANAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELEDKFENMGAQLVKEVSSKTSDAAGDGTTTATVLAQAIVREGMKAVTAGMNPMDLKRGI
DKAVTAAVEQLHAMSKPCADNNAIAQVGTISANSDESIGKIIADAMNKVGKEGVITVEEG
SGLDNELDVVEGMQFDRGYLSPYFVNNQQSMSAELENPFVLLYDKKISNIRELLPALEGA
AKAGKPLMIIAEDIEGEALATLVVNNIRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGMSLDQVTLDDLGQAKRINVTKETTTIIDGAGSAEDIKARVDQIRAQIEVTTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALQTLGGLKGENHDQDMGIKIAMRAMEEPLRQIVANAGESADVVLNAVEAGEGNYGYNA
RTSEYGDMIAMGILDPTKVTRTALQNAASVSGLIITTEAMVAEMPKKDAPAAPGMGGMGG
MDGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaaagaagtacgttttggtgatgatgctcgttcacgtatggtgaaaggcatt
aatgtattagccaatgctgttaaagttaccttaggtcctaaaggtcgtaacgttgtttta
gaaaaatcattcggtgcacctaccgttactaaagacggtgtatccgttgcgaaagaaatc
gaattagaagacaaattcgagaatatgggtgcgcaattagttaaagaagtttcttctaaa
acatctgacgcagccggtgacggtactactaccgcaaccgtattagctcaagcgattgta
cgcgaaggcatgaaagcagtgactgcgggcatgaatccaatggatttaaaacgcggtatt
gataaagcggtaacggcggcggttgaacaattacacgctatgtctaaaccttgcgcagat
aacaatgctatcgcacaagtaggcacaatctctgctaactctgatgagtccatcggcaaa
attattgcagatgcgatgaacaaagtaggcaaagaaggcgttattacggttgaagaaggt
tcaggtttagacaatgaactggacgttgtagaaggtatgcaatttgatcgtggctacctg
tcgccttacttcgttaacaatcaacaaagcatgtcagccgagttagaaaacccattcgtg
ctgttatatgacaaaaaaatctctaacattcgtgaattactgccagccttagaaggcgct
gcgaaagccggtaaaccactgatgattattgctgaagacatcgaaggcgaagcattagca
accttagtggttaacaatattcgcggtatcgtgaaagtagcagcagtgaaagcgccgggc
tttggtgatcgtcgtaaagccatgttacaagacatcgcaatcttaactggcggtacagtc
atttctgaagaagtcggcatgagcttagaccaagtaactttagacgacttgggtcaagca
aaacgcatcaatgttactaaagaaaccaccactattattgacggtgcgggttctgcggaa
gacattaaagcacgcgttgaccaaatccgtgcacaaatcgaagtgactacttcagattat
gaccgcgaaaaattacaagaacgcgtggctaaattagcaggcggcgttgcggtaattaaa
gtaggcgcggcaactgaagttgaaatgaaagagaaaaaagcacgcgtagaagatgcttta
catgcgacgcgtgcagcggttgaagaaggtgttgtaccgggcggtggtgttgcgttaatt
cgcgcattacaaacattaggtggcctcaaaggtgaaaaccacgatcaagatatgggtatc
aaaattgcgatgcgtgcaatggaagaacccttacgtcaaatcgtggcaaacgctggcgaa
tctgcggatgttgtgttgaatgcagtggaagcaggcgaaggcaactacggttataacgca
cgtacttctgaatacggcgatatgattgctatgggtattttagacccgactaaagtaaca
cgtacggctttacaaaatgcggcttctgtttctggtttaatcattaccactgaagcaatg
gttgcggaaatgcctaagaaagatgcacctgctgccccaggtatgggtggcatgggcggt
atggatggcatgatgtaa
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