Candidatus Thiocaldithrix dubininis: QJT80_05425
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Entry
QJT80_05425 CDS
T09759
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdu03021
]
QJT80_05425 (rpoS)
Transcription machinery [BR:
tdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QJT80_05425 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
TetR_N
Motif
Other DBs
NCBI-ProteinID:
WGZ91921
UniProt:
A0AA95KGQ9
LinkDB
All DBs
Position
1131266..1132270
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AA seq
334 aa
AA seq
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MPRLQTHLRTKEEEPFIAAFDANEEETLDELEELADEPQEDNYLELNTLATASVATDLDA
TQLYLREIEFSPLLTPEEEIHYGRLARDGDAFGRKKMITCNLRLVVKIARRYMGRGLPLP
DLIEEGNLGLIHAVEKFDPERGFRFSTYATWWIRQNIERALMNQTRTIRLPIHVNKELNA
YLRKVRDMTQKLGYEPSLQEVAVAMDKPIESLRKLLDFNERITSLDIPVGKDGDSPLVDF
VSSEESQEPGGKLEDEEISHSVDSWLSQLEFKQREVIVRRFGLHGYERATLEQVGEALGL
TRERVRQIQMDALKRLRRILENKGLSGESLLGLN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcttacagactcacttgcgcaccaaggaagaagaaccctttattgctgcgttt
gatgctaatgaagaagaaacgctagatgaattagaagagctggcggatgagccacaagaa
gataactatttagagttaaatacgttagcaaccgctagtgttgccactgatctcgatgca
acacagctctacctgcgcgaaattgaattttctcctttgttaacccccgaagaagaaatt
cattatgggcgcttagcgcgtgacggtgatgccttcggccggaaaaaaatgattacctgt
aatttacgtttggtagtcaaaattgcgcgtcgttatatgggacgtggtttgccattaccc
gacttaattgaagaaggcaatttaggtttaattcacgcggtcgaaaaatttgaccccgaa
cgtggattccgtttttctacctatgcgacgtggtggattcggcaaaatattgaacgtgcg
ttaatgaatcaaactcgcacgattcgcttgccgattcatgtgaataaagagctgaatgct
tatttacgtaaagtgcgcgatatgacgcaaaaattgggttatgaacccagtttacaggaa
gttgcggtggcgatggataagccaatcgagtccttacgtaaattgctggatttcaatgag
cgcattacctcattggatattccggtcggcaaagacggcgatagcccgctagtagacttt
gtgagtagcgaagaatcacaagaaccgggcgggaaactcgaagacgaagaaatcagccat
tctgtggatagctggttaagtcaattagagtttaaacaacgtgaggtcattgtgcgtcgc
tttggcttacacggttatgagcgtgccacgctagaacaagtgggtgaagctttaggctta
acgcgtgagcgagtacgccaaattcaaatggatgctctgaaacgtttacgccgtattttg
gaaaacaagggattgtctggcgaaagcctgttaggtctcaactag
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