Candidatus Thiocaldithrix dubininis: QJT80_07505
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Entry
QJT80_07505 CDS
T09759
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdu03016
]
QJT80_07505
Enzymes [BR:
tdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
QJT80_07505
Transfer RNA biogenesis [BR:
tdu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
QJT80_07505
Prokaryotic type
QJT80_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WGZ92323
UniProt:
A0AA95HA86
LinkDB
All DBs
Position
complement(1593649..1594620)
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AA seq
323 aa
AA seq
DB search
MQVIFLGTSSGTPTRDRNVSGIAIGSTQDKAWCLVDCGEGTQHQLLKTPLSLLNLQAICI
THVHGDHCYGLPGLLASAALAGRTAPLYLLAPRAIQTFIATMQATTQLWLSYELQFVAID
EPHALPDLLFDLSITELSHRVPSFAFTFTEKAVEHKLDTAKLKQAGIAPGAIWGQLQQGQ
TVNLPDGRVLIAADYLQAPRKARRIIIAGDNDTPRLLADVAHSAEVLIHEATYTEDIAAK
VGTHPQHCTAQRVAEFAQTLSLPHLILTHFSARYRGDKDESPSLWDLQREAQAVYVGNVQ
MARDFSVFVLQKNGQLTRSELPA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttatattcttaggcacatcctctggcacacctacgcgggatcgtaatgtttca
ggcattgcgataggttcaacgcaggataaagcgtggtgtttggtggattgtggtgaaggc
acgcagcatcaattattaaaaacgccgttgtccttgttaaatctacaagcgatttgtatt
acgcatgtgcacggcgatcattgttatggcctgccgggtttattggcgagtgccgccttg
gcggggcgaactgcccctttatatttgcttgcgccgcgtgcgattcaaacatttattgcc
actatgcaagccactacgcaactgtggttgagttatgaacttcagtttgtggcgattgac
gagccgcatgcattacccgatttgttatttgatttaagtattaccgaactttcgcatcgt
gtgccctcgtttgcgtttacctttaccgaaaaagcggtggaacataaattagataccgct
aaattaaagcaagcaggtatcgcgccgggtgcgatttgggggcagctacagcaagggcaa
acggtcaacttgccagatgggcgtgtgctaatcgcagcggattatttacaagcgccgcgt
aaagcacggcgaattatcattgcaggcgataatgacacgccgcgtttattagcggatgtg
gcgcattcggcagaggttttaattcacgaggcaacttataccgaagatattgcagcaaaa
gtaggcacacacccgcagcattgcaccgcacaacgagtggctgaatttgcgcaaacgctg
agcttaccgcatttaattttaacgcatttcagtgcgcgttatcgcggtgataaggacgaa
tcgccatcgttgtgggatttgcaacgcgaagcgcaagcggtgtatgtcggtaatgtgcaa
atggcgcgggatttttcggtatttgtcttacaaaaaaatgggcaacttacccgcagtgaa
ttgcccgcgtaa
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